RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 JPH1Q9HDC5 661 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 SLC9A2Q9UBY0 812 aa18.36■□□□□ 0.53
DNMT3A-215ENST00000496570 TRIP12Q14669 1992 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 LGR5O75473 907 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 ATG7O95352 703 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 ZNF76P36508 570 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 TRIM71Q2Q1W2 868 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 UTP14CQ5TAP6 766 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 TMEM199Q8N511 208 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 TBCKQ8TEA7 893 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 SCLYQ96I15 445 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 UIMC1Q96RL1 719 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.534e-7■□□□□ 11.1
DNMT3A-215ENST00000496570 RNPEPQ9H4A4 650 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 SCN5AQ14524 2016 aa18.35■□□□□ 0.53
DNMT3A-215ENST00000496570 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 ACRP10323 421 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 USP11P51784 963 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 ACTR2P61160 394 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 ADAM17P78536 824 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 RBL2Q08999 1139 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.534e-8■□□□□ 10
DNMT3A-215ENST00000496570 GPNMBQ14956 572 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 TRAF7Q6Q0C0 670 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 TBC1D32Q96NH3 1257 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
DNMT3A-215ENST00000496570 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
DNMT3A-215ENST00000496570 IGKV6D-21A0A0A0MT36 114 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 IPO5O00410 1097 aaKnown RBP18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 SETQ01105 290 aaPredicted RBP18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 RABEP1Q15276 862 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 PRR16Q569H4 304 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 TNFRSF25Q93038 417 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 MBOAT7Q96N66 472 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 SDF4Q9BRK5 362 aa18.33■□□□□ 0.52
DNMT3A-215ENST00000496570 CYP3A7-CYP3A51PA0A087WV96 503 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 MSH4O15457 936 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 CD2BP2O95400 341 aaKnown RBP18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 SLC34A2O95436 690 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 TDP2O95551 362 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 IQCF3P0C7M6 154 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 CYP3A7P24462 503 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 PTK7Q13308 1070 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 ABHD15Q6UXT9 468 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 ZNF365Q70YC5 407 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 SERINC5Q86VE9 423 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 WASF1Q92558 559 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 NOD1Q9Y239 953 aa18.32■□□□□ 0.52
DNMT3A-215ENST00000496570 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 DDX39AO00148 427 aaKnown RBP18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 TREHO43280 583 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 CKBP12277 381 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 BFSP2Q13515 415 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 NONOQ15233 471 aaKnown RBP eCLIP18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 INF2Q27J81 1249 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 Q4G0T1 1027 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 KRT25Q7Z3Z0 450 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 SMARCAD1Q9H4L7 1026 aa18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 ZNF215Q9UL58 517 aaPredicted RBP18.31■□□□□ 0.52
DNMT3A-215ENST00000496570 MARK3P27448 753 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 NR5A1Q13285 461 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 SLC5A5Q92911 643 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 ATP6V0A1Q93050 837 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 GJA10Q969M2 543 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 LLPHQ9BRT6 129 aaKnown RBP18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 ERAP1Q9NZ08 941 aa18.3■□□□□ 0.52
DNMT3A-215ENST00000496570 MMP1P03956 469 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 XBP1P17861 261 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 MBTPS1Q14703 1052 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 MARCH8Q5T0T0 291 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 ZNF618Q5T7W0 954 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 KRT40Q6A162 431 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 FAM109BQ6ICB4 259 aaPredicted RBP18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 PSRC1Q6PGN9 363 aaPredicted RBP18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 MOXD1Q6UVY6 613 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 PLPPR4Q7Z2D5 763 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 CCDC60Q8IWA6 550 aaPredicted RBP18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 ETNPPLQ8TBG4 499 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 HERVK_113Q902F9 699 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 GLG1Q92896 1179 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 TBC1D22BQ9NU19 505 aa18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 CXXC1Q9P0U4 656 aaPredicted RBP18.29■□□□□ 0.52
DNMT3A-215ENST00000496570 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms