RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 FERMT2Q96AC1 680 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 ARPC5LQ9BPX5 153 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SLC26A6Q9BXS9 759 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 ISCUQ9H1K1 167 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CUEDC2Q9H467 287 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 INTS13Q9NVM9 706 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 MLH3Q9UHC1 1453 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 A0A0U1RQJ8 604 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SMIM31A0A1B0GVY4 71 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 EEF1GP26641 437 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 ADD1P35611 737 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 MARK2Q7KZI7 788 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CROCCP3Q8IVE0 287 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TTLL11Q8NHH1 800 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CORO1BQ9BR76 489 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 FGFR1OP2Q9NVK5 253 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SAP30BPQ9UHR5 308 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CROTQ9UKG9 612 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TRAF3IP3Q9Y228 551 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 DIP2CQ9Y2E4 1556 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 NRXN1Q9ULB1 1477 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 PGRMC1O00264 195 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CHL1O00533 1208 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CAPN9O14815 690 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 GYG2O15488 501 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TJP3O95049 919 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 ITGA2BP08514 1039 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 PMS2P54278 862 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CCDC84Q86UT8 332 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SPATA17Q96L03 361 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TIPINQ9BVW5 301 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TMEM60Q9H2L4 133 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 LRRC42Q9Y546 428 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 F8VZ95 297 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 BIRC5O15392 142 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TAF5LO75529 589 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 RPL13P26373 211 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CDC25AP30304 524 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 AP2B1P63010 937 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 ITGA7Q13683 1181 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 TCP11X2Q5H9J9 407 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SCUBE1Q8IWY4 988 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 CSGALNACT2Q8N6G5 542 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 PAF1Q8N7H5 531 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SCG3Q8WXD2 468 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 POLR3CQ9BUI4 534 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 BRD8Q9H0E9 1235 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 BHMT2Q9H2M3 363 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SYNCQ9H7C4 482 aa8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 FBXO9Q9UK97 447 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-205ENST00000496549 SALL3Q9BXA9 1300 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 GFPT2O94808 682 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 VAV1P15498 845 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 DSG1Q02413 1049 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 CNPY1Q3B7I2 92 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 LIN52Q52LA3 116 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 DPY19L2Q6NUT2 758 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 TMEM53Q6P2H8 277 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 LRRC8BQ6P9F7 803 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 DDHD1Q8NEL9 900 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 DTX3LQ8TDB6 740 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 ERP27Q96DN0 273 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 PBKQ96KB5 322 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 AZI2Q9H6S1 392 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 TUBGCP4Q9UGJ1 667 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 KIDINS220Q9ULH0 1771 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 ZNF213O14771 459 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 DNAJC6O75061 913 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 ZWINTO95229 277 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 NOP14P78316 857 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 CLUL1Q15846 466 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 SHC4Q6S5L8 630 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 B3GNT6Q6ZMB0 384 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 MB21D1Q8N884 522 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 UHMK1Q8TAS1 419 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 CASKIN2Q8WXE0 1202 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 SPATA16Q9BXB7 569 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 MLXIPQ9HAP2 919 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 ARHGEF38Q9NXL2 777 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 MAPK8IP1Q9UQF2 711 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 ABCC12Q96J65 1359 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 GPR75-ASB3A0A0A6YYF3 556 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 TMEM247A6NEH6 219 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 PDE2AO00408 941 aaPredicted RBP8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 SPAG7O75391 227 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 FAM153BP0C7A2 387 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 ETS2P15036 469 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 KCNA2P16389 499 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 SKIV2L2P42285 1042 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 SLCO1A2P46721 670 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 CLCN2P51788 898 aa8.84□□□□□ -0.99
CRNKL1-205ENST00000496549 KIF11P52732 1056 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms