RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 KCTD10Q9H3F6 313 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 CEP72Q9P209 647 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 TMX2Q9Y320 296 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 SSU72P8A0A1W2PR75 194 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 MACROD2A1Z1Q3 448 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 TACC1O75410 805 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 PLEKP08567 350 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 SPATA31C1P0DKV0 1188 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 ERCC3P19447 782 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 PLA2G4AP47712 749 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 GIT2Q14161 759 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 DLGAP5Q15398 846 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 LONRF2Q1L5Z9 754 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 PDXDC1Q6P996 788 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 RTKN2Q8IZC4 609 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 BAP1Q92560 729 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 POLR3CQ9BUI4 534 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 FGFBP2Q9BYJ0 223 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 EHMT1Q9H9B1 1298 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 TFR2Q9UP52 801 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 PCDHA13Q9Y5I0 950 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 RCCD1A6NED2 376 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 OPLAHO14841 1288 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 EIF4A3P38919 411 aaKnown RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 ECE1P42892 770 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 KCNMA1Q12791 1236 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 TRIM59Q8IWR1 403 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 ZC3H3Q8IXZ2 948 aaKnown RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 SYN2Q92777 582 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 ALS2CR12Q96Q35 445 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 ZNF70Q9UC06 446 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 JRKLQ9Y4A0 524 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 MEIS1O00470 390 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 ZNF263O14978 683 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 NR2F2P24468 414 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 MCM3P25205 808 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 PSMC6P62333 389 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 TERF2Q15554 542 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 KNOP1Q1ED39 458 aaKnown RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 SFMBT2Q5VUG0 894 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 IQCEQ6IPM2 695 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 KRT26Q7Z3Y9 468 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 SMCR8Q8TEV9 937 aaPredicted RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 PSMD1Q99460 953 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 REEP2Q9BRK0 252 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 FUT8Q9BYC5 575 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 SH2D4AQ9H788 454 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 LUC7LQ9NQ29 371 aaKnown RBP12.22□□□□□ -0.45
CMSS1-208ENST00000496116 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 VAV3Q9UKW4 847 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 TRAF3IP3Q9Y228 551 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
CMSS1-208ENST00000496116 GCOM1H8Y6P7 765 aaPredicted RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 TBCAO75347 108 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 SASH3O75995 380 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 CFBP00751 764 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 TFRCP02786 760 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 POLR2MP0CAP2 368 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 GPS2Q13227 327 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 TDRD12Q587J7 1177 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 CCDC155Q8N6L0 562 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 TTLL6Q8N841 843 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 PNKPQ96T60 521 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 EIF2AK1Q9BQI3 630 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 LSM14BQ9BX40 385 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 JADE2Q9NQC1 790 aa12.21□□□□□ -0.45
CMSS1-208ENST00000496116 MRPL11Q9Y3B7 192 aaKnown RBP12.21□□□□□ -0.45
CMSS1-208ENST00000496116 ATAD5Q96QE3 1844 aa12.21□□□□□ -0.46
CMSS1-208ENST00000496116 PDXKO00764 312 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 EYA4O95677 639 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 SERPING1P05155 500 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 CYP4A11Q02928 519 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 HDXQ7Z353 690 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 FAM160B2Q86V87 743 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 CAGE1Q8TC20 777 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 BHMT2Q9H2M3 363 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
CMSS1-208ENST00000496116 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 DUSP10Q9Y6W6 482 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 PJA2O43164 708 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 TBC1D12O60347 775 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 PLA2G6O60733 806 aa12.2□□□□□ -0.46
CMSS1-208ENST00000496116 RAD17O75943 681 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms