RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 BRD1O95696 1058 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 TCF7P36402 384 aaPredicted RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 CHMP4BP1P59074 171 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 PURAQ00577 322 aaKnown RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 PTGDRQ13258 359 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 MIS18BP1Q6P0N0 1132 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 SMAP1Q8IYB5 467 aaPredicted RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 GLT1D1Q96MS3 346 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 MTG1Q9BT17 334 aaPredicted RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 UNC45AQ9H3U1 944 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
HDAC9-226ENST00000496026 PCDHA12Q9UN75 941 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 CEP131Q9UPN4 1083 aa16.64■□□□□ 0.25
HDAC9-226ENST00000496026 LAD1O00515 517 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 BACH1O14867 736 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 CAPN15O75808 1086 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 PSAPP07602 524 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 HOXD8P13378 290 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-226ENST00000496026 SFNP31947 248 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 JAK3P52333 1124 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 NUCB2P80303 420 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 FOXD4L6Q3SYB3 417 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-226ENST00000496026 FOXD4L3Q6VB84 417 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-226ENST00000496026 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 ZNF396Q96N95 335 aaPredicted RBP16.63■□□□□ 0.25
HDAC9-226ENST00000496026 AZI2Q9H6S1 392 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 STARD7Q9NQZ5 370 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 DISC1Q9NRI5 854 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 FRMPD3Q5JV73 1810 aa16.63■□□□□ 0.25
HDAC9-226ENST00000496026 CENPFP49454 3210 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 BMP15O95972 392 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 LGALS2P05162 132 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 COL6A1P12109 1028 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
HDAC9-226ENST00000496026 PPP2R5CQ13362 524 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
HDAC9-226ENST00000496026 TMEM266Q2M3C6 531 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 GLG1Q92896 1179 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 KATNAL1Q9BW62 490 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 VAV3Q9UKW4 847 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 PCDHA10Q9Y5I2 948 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 CLIC4Q9Y696 253 aa16.62■□□□□ 0.25
HDAC9-226ENST00000496026 H3BRB1 525 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 ATG7O95352 703 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 DDIT3P35638 169 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 TECP42680 631 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 PSMC6P62333 389 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 FAM160B1Q5W0V3 765 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 SWSAP1Q6NVH7 229 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 ABHD15Q6UXT9 468 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 UBE2Q1Q7Z7E8 422 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 RDM1Q8NG50 284 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
HDAC9-226ENST00000496026 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
HDAC9-226ENST00000496026 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
HDAC9-226ENST00000496026 ZNF302Q9NR11 478 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 ZNF215Q9UL58 517 aaPredicted RBP16.61■□□□□ 0.25
HDAC9-226ENST00000496026 ZDHHC9Q9Y397 364 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
HDAC9-226ENST00000496026 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
HDAC9-226ENST00000496026 LGR5O75473 907 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 F2P00734 622 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 MARK3P27448 753 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 PRPHP41219 470 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 PSEN2P49810 448 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 STAT5BP51692 787 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 ATN1P54259 1190 aaPredicted RBP16.6■□□□□ 0.25
HDAC9-226ENST00000496026 ATP2C1P98194 919 aaPredicted RBP16.6■□□□□ 0.25
HDAC9-226ENST00000496026 ITGA7Q13683 1181 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 MFSD10Q14728 455 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 B3GNT9Q6UX72 402 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 KAT2BQ92831 832 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 USP28Q96RU2 1077 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
HDAC9-226ENST00000496026 CIZ1Q9ULV3 898 aaPredicted RBP16.6■□□□□ 0.25
HDAC9-226ENST00000496026 ATP6V1DQ9Y5K8 247 aa16.6■□□□□ 0.25
HDAC9-226ENST00000496026 IGKV6D-21A0A0A0MT36 114 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 EML1O00423 815 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 SPIRE1Q08AE8 756 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 NBPF20Q3BBV1 942 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 FAM47CQ5HY64 1035 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 PDXDC2PQ6P474 469 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 SLC39A5Q6ZMH5 540 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 CCDC60Q8IWA6 550 aaPredicted RBP16.59■□□□□ 0.25
HDAC9-226ENST00000496026 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 PCYT2Q99447 389 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 RAB34Q9BZG1 259 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 ERAP1Q9NZ08 941 aa16.59■□□□□ 0.25
HDAC9-226ENST00000496026 GABBR1Q9UBS5 961 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms