RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 CTSHP09668 335 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 ARHGAP4P98171 946 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 TYW1BQ6NUM6 668 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 LMBR1Q8WVP7 490 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 ATXN2LQ8WWM7 1075 aaKnown RBP19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 SEPT1Q8WYJ6 367 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 RIC8AQ9NPQ8 531 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 JADE2Q9NQC1 790 aa19.41■□□□□ 0.7
APOBEC3A-204ENST00000495988 CHD7Q9P2D1 2997 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 hCG_1984214I3L0E3 225 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 CAND2O75155 1236 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 RCAN1P53805 252 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 FAM117BQ6P1L5 589 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 ZNF713Q8N859 430 aaPredicted RBP19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 RAD9AQ99638 391 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 NRCAMQ92823 1304 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 KAT6AQ92794 2004 aa19.4■□□□□ 0.7
APOBEC3A-204ENST00000495988 GSTTP1A0A1W2PQM5 241 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 CPA1P15085 419 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 CDC27P30260 824 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 ADCY7P51828 1080 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 ADAM17P78536 824 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 PLEKHG4Q58EX7 1191 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 SPRED2Q7Z698 418 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 TEX2Q8IWB9 1127 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 GLG1Q92896 1179 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 PGBD1Q96JS3 809 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 JAKMIP1Q96N16 626 aaKnown RBP19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 MXRA8Q9BRK3 442 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 FAM217BQ9NTX9 383 aaPredicted RBP19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 MTCH2Q9Y6C9 303 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 VCANP13611 3396 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 MICAL3Q7RTP6 2002 aa19.39■□□□□ 0.69
APOBEC3A-204ENST00000495988 SMCO2A6NFE2 343 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 STXBP3O00186 592 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 FOSP01100 380 aaPredicted RBP19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 AMHP03971 560 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 POU3F3P20264 500 aaPredicted RBP19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 MARK3P27448 753 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 METAP2P50579 478 aaKnown RBP eCLIP19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 Q6ZUG5 572 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 SEPT8Q92599 483 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 ANO3Q9BYT9 981 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 JPH1Q9HDC5 661 aaPredicted RBP19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 KCNH7Q9NS40 1196 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 BARHL2Q9NY43 387 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 ERAP1Q9NZ08 941 aa19.38■□□□□ 0.69
APOBEC3A-204ENST00000495988 HSPA4P34932 840 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 ADD1P35611 737 aaKnown RBP19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 MRPS5P82675 430 aaKnown RBP19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 APOBRQ0VD83 1088 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 PPFIA1Q13136 1202 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 GRB10Q13322 594 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 MKRN4PQ13434 485 aaPredicted RBP19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 SKIV2LQ15477 1246 aaKnown RBP19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 KRT40Q6A162 431 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 MYOCDQ8IZQ8 938 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 CYP2W1Q8TAV3 490 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 KCNB2Q92953 911 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 ASB2Q96Q27 587 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 OSBPL7Q9BZF2 842 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 GLT8D2Q9H1C3 349 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 SMARCAD1Q9H4L7 1026 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 TMEM260Q9NX78 707 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 SLC9A2Q9UBY0 812 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 SNX14Q9Y5W7 946 aa19.37■□□□□ 0.69
APOBEC3A-204ENST00000495988 CCDC196A0A1B0GTZ2 297 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 AP3B2Q13367 1082 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 GRIK4Q16099 956 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 FAM26DQ5JW98 314 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 TAF2Q6P1X5 1199 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 BLOC1S2Q6QNY1 142 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 BRF1Q92994 677 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 TGS1Q96RS0 853 aaKnown RBP19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 SDF4Q9BRK5 362 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 MTUS1Q9ULD2 1270 aa19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 COL4A4P53420 1690 aaPredicted RBP19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 PRRC2BQ5JSZ5 2229 aaKnown RBP19.36■□□□□ 0.69
APOBEC3A-204ENST00000495988 LINC01553A4QN01 128 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 ARP10275 920 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 PFKFB3Q16875 520 aaPredicted RBP19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 CEP55Q53EZ4 464 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 RUFY4Q6ZNE9 571 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 APBB2Q92870 758 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 AZI2Q9H6S1 392 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 TUBE1Q9UJT0 475 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 INSL6Q9Y581 213 aa19.35■□□□□ 0.69
APOBEC3A-204ENST00000495988 NFASCO94856 1347 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 LPXNO60711 386 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 SCG2P13521 617 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 ZNF76P36508 570 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 SREBF1P36956 1147 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 CLK2P49760 499 aaKnown RBP19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 ERVK-21P61565 698 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 RPAINQ86UA6 219 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 RSPH3Q86UC2 560 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 IL27Q8NEV9 243 aa19.34■□□□□ 0.69
APOBEC3A-204ENST00000495988 GDPD5Q8WTR4 605 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms