RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 GOLGA6L19H0YKK7 550 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 NR3C2P08235 984 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 ITGB5P18084 799 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 MRPS9P82933 396 aaKnown RBP12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 PPP2R5CQ13362 524 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 CUL4BQ13620 913 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 NCAPH2Q6IBW4 605 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 ANKRD23Q86SG2 305 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 VSIG10LQ86VR7 867 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 DHX40Q8IX18 779 aaKnown RBP12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 KCTD17Q8N5Z5 321 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 TRIM47Q96LD4 638 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 UIMC1Q96RL1 719 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 PAGR1Q9BTK6 254 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 POLR3CQ9BUI4 534 aaPredicted RBP12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 BLZF1Q9H2G9 400 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 RBPJLQ9UBG7 517 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 A0A0C4DFX4 3053 aa12.02□□□□□ -0.49
ECHDC3-204ENST00000495787 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 IKBKBO14920 756 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 GAS7O60861 476 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 STAM2O75886 525 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 MYCLP12524 364 aaPredicted RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 CCL5P13501 91 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 BMP6P22004 513 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 RPA1P27694 616 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 CTGFP29279 349 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 CASP1P29466 404 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 CCDC173Q0VFZ6 552 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 KCNB1Q14721 858 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 ECM1Q16610 540 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 NCAPG2Q86XI2 1143 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 ANKRD35Q8N283 1001 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 DNERQ8NFT8 737 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 CCDC47Q96A33 483 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 IWS1Q96ST2 819 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 RNF208Q9H0X6 261 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 AGO4Q9HCK5 861 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 TUFT1Q9NNX1 390 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 KCNH7Q9NS40 1196 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 CPA4Q9UI42 421 aa12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-204ENST00000495787 LOXHD1Q8IVV2 1947 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 PDHXO00330 501 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 IPO5O00410 1097 aaKnown RBP12□□□□□ -0.49
ECHDC3-204ENST00000495787 EML1O00423 815 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 MAFGO15525 162 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 KLRC4O43908 158 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 MED24O75448 989 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 FARP2O94887 1054 aaPredicted RBP12□□□□□ -0.49
ECHDC3-204ENST00000495787 ERCC3P19447 782 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 MUTP22033 750 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 MTMR1Q13613 665 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 MCM6Q14566 821 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 EPHA7Q15375 998 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 B3GNT9Q6UX72 402 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 CATSPER3Q86XQ3 398 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 AOPEPQ8N6M6 819 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 SHCBP1Q8NEM2 672 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 GPRASP2Q96D09 838 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 EIF2AK1Q9BQI3 630 aaKnown RBP12□□□□□ -0.49
ECHDC3-204ENST00000495787 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
ECHDC3-204ENST00000495787 TRIM9Q9C026 710 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 TXNRD2Q9NNW7 524 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 KIAA1024Q9UPX6 916 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 COL6A3P12111 3177 aa12□□□□□ -0.49
ECHDC3-204ENST00000495787 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 DHX15O43143 795 aaKnown RBP11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 PEX10O60683 326 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 SPATA31C1P0DKV0 1188 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 ERCC5P28715 1186 aaPredicted RBP11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 ERVK-9P63128 1117 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 ERVK-24P63145 666 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 TPM4P67936 248 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 Q3C1V9 767 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 ZNF658Q5TYW1 1059 aaPredicted RBP11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 NEK9Q8TD19 979 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 U2AF1L4Q8WU68 220 aaKnown RBP11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 PDLIM2Q96JY6 352 aa11.99□□□□□ -0.49
ECHDC3-204ENST00000495787 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms