RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MAGEF1	Q9HAY2	307 aa		15.21	■□□□□ 0.03
APTX-231	ENST00000494973	SPC25	Q9HBM1	224 aa		15.21	■□□□□ 0.03
APTX-231	ENST00000494973	DISC1	Q9NRI5	854 aa		15.21	■□□□□ 0.03
APTX-231	ENST00000494973	HOOK1	Q9UJC3	728 aa	Known RBP	15.21	■□□□□ 0.03
APTX-231	ENST00000494973	PCDHA10	Q9Y5I2	948 aa		15.21	■□□□□ 0.03
APTX-231	ENST00000494973	DDX39A	O00148	427 aa	Known RBP	15.2	■□□□□ 0.02
APTX-231	ENST00000494973	SEPT4	O43236	478 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	CHMP2A	O43633	222 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	ATP9A	O75110	1047 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	PRKAR2A	P13861	404 aa	Known RBP	15.2	■□□□□ 0.02
APTX-231	ENST00000494973	PFKFB1	P16118	471 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	RPA1	P27694	616 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	ADCYAP1R1	P41586	468 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	SYK	P43405	635 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	NFKBIB	Q15653	356 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	IL17A	Q16552	155 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	FAM160B1	Q5W0V3	765 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	CYFIP1	Q7L576	1253 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	IQUB	Q8NA54	791 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	PPTC7	Q8NI37	304 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	SEPT1	Q8WYJ6	367 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	STK17A	Q9UEE5	414 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	KCNH3	Q9ULD8	1083 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	PTPN22	Q9Y2R2	807 aa		15.2	■□□□□ 0.02
APTX-231	ENST00000494973	LOXHD1	Q8IVV2	1947 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	FOXN1	O15353	648 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	KIN	O60870	393 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	DUSP11	O75319	330 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	ARIH2	O95376	493 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	P4HB	P07237	508 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	CCT6A	P40227	531 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	CPT1A	P50416	773 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	SLC26A2	P50443	739 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	ACTR2	P61160	394 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	LY6K	Q17RY6	165 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	HYI	Q5T013	277 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	MAP3K21	Q5TCX8	1036 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	KANK3	Q6NY19	840 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	OR6J1	Q8NGC5	347 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	SPATA33	Q96N06	139 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	EIF2AK1	Q9BQI3	630 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	LRRC27	Q9C0I9	530 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	AP5M1	Q9H0R1	490 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	AZI2	Q9H6S1	392 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	PDGFC	Q9NRA1	345 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	DDX19A	Q9NUU7	478 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	HPSE	Q9Y251	543 aa		15.19	■□□□□ 0.02
APTX-231	ENST00000494973	DDX49	Q9Y6V7	483 aa	Known RBP	15.19	■□□□□ 0.02
APTX-231	ENST00000494973	EMSY	Q7Z589	1322 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	ZEB2	O60315	1214 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	ATG7	O95352	703 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	SUPT20HL2	P0C7V6	817 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	RARB	P10826	455 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	ELN	P15502	786 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	SMPD1	P17405	629 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	STAT6	P42226	847 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	QARS	P47897	775 aa	Known RBP	15.18	■□□□□ 0.02
APTX-231	ENST00000494973	PSMC5	P62195	406 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	SP2	Q02086	613 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	GRIN1	Q05586	938 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	ARHGAP1	Q07960	439 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	CACNB2	Q08289	660 aa	Predicted RBP	15.18	■□□□□ 0.02
APTX-231	ENST00000494973	RRAGB	Q5VZM2	374 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	TLK2	Q86UE8	772 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	CEP57L1	Q8IYX8	460 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	FAM167A	Q96KS9	214 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	TIGD1	Q96MW7	591 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	ZSWIM4	Q9H7M6	989 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973	GNE	Q9Y223	722 aa	Known RBP	15.18	■□□□□ 0.02
APTX-231	ENST00000494973	PTCH2	Q9Y6C5	1203 aa		15.18	■□□□□ 0.02
APTX-231	ENST00000494973		A0A1B0GVL5	298 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	BACH1	O14867	736 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	KPNA6	O60684	536 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	GADD45B	O75293	160 aa	Predicted RBP	15.17	■□□□□ 0.02
APTX-231	ENST00000494973	LYPLA2	O95372	231 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	CCNE2	O96020	404 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	INHA	P05111	366 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	CNGA1	P29973	690 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	CAP1	Q01518	475 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	KLHL40	Q2TBA0	621 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	SLC9C1	Q4G0N8	1177 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	FBXO46	Q6PJ61	603 aa	Predicted RBP	15.17	■□□□□ 0.02
APTX-231	ENST00000494973	AFAP1L1	Q8TED9	768 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	GJA10	Q969M2	543 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	EPSTI1	Q96J88	318 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	GPR20	Q99678	358 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	HSD17B14	Q9BPX1	270 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	HMX1	Q9NP08	348 aa	Predicted RBP	15.17	■□□□□ 0.02
APTX-231	ENST00000494973	ZNF215	Q9UL58	517 aa	Predicted RBP	15.17	■□□□□ 0.02
APTX-231	ENST00000494973	PPME1	Q9Y570	386 aa		15.17	■□□□□ 0.02
APTX-231	ENST00000494973	EML1	O00423	815 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	PPFIA4	O75335	1185 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	MYL1	P05976	194 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	XRCC6	P12956	609 aa	Known RBP eCLIP	15.16	■□□□□ 0.02
APTX-231	ENST00000494973	CAPN2	P17655	700 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	NDUFA8	P51970	172 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	LBX1	P52954	281 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	AMPD3	Q01432	767 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	DGKD	Q16760	1214 aa		15.16	■□□□□ 0.02
APTX-231	ENST00000494973	TMEM119	Q4V9L6	283 aa		15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms