RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CCPG1Q9ULG6 757 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 TBC1D12O60347 775 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 CCDC175P0C221 793 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 HERVK_113P62684 666 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 KCNMA1Q12791 1236 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 ANGEL2Q5VTE6 544 aaKnown RBP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 MYOCDQ8IZQ8 938 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 NDST4Q9H3R1 872 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 UNC45AQ9H3U1 944 aa11.54□□□□□ -0.56
SAMM50-206ENST00000494795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.54□□□□□ -0.56
SAMM50-206ENST00000494795 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 PIK3CDO00329 1044 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 ZSCAN12O43309 604 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 PSMD10O75832 226 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 RPA1P27694 616 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 CIITAP33076 1130 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 HIRAP54198 1017 aaPredicted RBP11.53□□□□□ -0.56
SAMM50-206ENST00000494795 COG2Q14746 738 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 ZNF569Q5MCW4 686 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 ANKRD20A12PQ8NF67 263 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 MTFR1LQ9H019 292 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 MMRN2Q9H8L6 949 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 SIK3Q9Y2K2 1263 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 LUC7L2Q9Y383 392 aaKnown RBP11.53□□□□□ -0.56
SAMM50-206ENST00000494795 ENC1O14682 589 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 CLIC2O15247 247 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 FLOT1O75955 427 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
SAMM50-206ENST00000494795 ASNSP08243 561 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 VCAM1P19320 739 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
SAMM50-206ENST00000494795 EPS15P42566 896 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 CASP4P49662 377 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 MAP3K10Q02779 954 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 VWA3BQ502W6 1294 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 FBXO38Q6PIJ6 1188 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
SAMM50-206ENST00000494795 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
SAMM50-206ENST00000494795 BICDL2A1A5D9 508 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 EIF2AK2P19525 551 aaKnown RBP11.52□□□□□ -0.56
SAMM50-206ENST00000494795 FECHP22830 423 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 DNM2P50570 870 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 ZNF280AP59817 542 aaPredicted RBP11.52□□□□□ -0.56
SAMM50-206ENST00000494795 PLS1Q14651 629 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 SLFN12Q8IYM2 578 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 TAAR1Q96RJ0 339 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 DNAJC7Q99615 494 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 HSD17B14Q9BPX1 270 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 NLRC4Q9NPP4 1024 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 GUCA1BQ9UMX6 200 aa11.52□□□□□ -0.56
SAMM50-206ENST00000494795 NDUFA10O95299 355 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 MRPS9P82933 396 aaKnown RBP11.52□□□□□ -0.57
SAMM50-206ENST00000494795 ENOX2Q16206 610 aaKnown RBP11.52□□□□□ -0.57
SAMM50-206ENST00000494795 PDCL2Q8N4E4 241 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 OR8K1Q8NGG5 319 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.57
SAMM50-206ENST00000494795 ATG4CQ96DT6 458 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 TISP43B9A030 160 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 ATP9AO75110 1047 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 ACTN1P12814 892 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 CASQ1P31415 396 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 CEP55Q53EZ4 464 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 FKBP1CQ5VVH2 108 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 SYT2Q8N9I0 419 aaPredicted RBP11.52□□□□□ -0.57
SAMM50-206ENST00000494795 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 DNM3Q9UQ16 869 aa11.52□□□□□ -0.57
SAMM50-206ENST00000494795 EPN1Q9Y6I3 576 aaPredicted RBP11.52□□□□□ -0.57
SAMM50-206ENST00000494795 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 CYP3A4P08684 503 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
SAMM50-206ENST00000494795 KCTD19Q17RG1 926 aaPredicted RBP11.51□□□□□ -0.57
SAMM50-206ENST00000494795 RINT1Q6NUQ1 792 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 ZNF577Q9BSK1 485 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 R3HDMLQ9H3Y0 253 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
SAMM50-206ENST00000494795 PUF60Q9UHX1 559 aaKnown RBP11.51□□□□□ -0.57
SAMM50-206ENST00000494795 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
SAMM50-206ENST00000494795 HMGCS2P54868 508 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 MOXD1Q6UVY6 613 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 CYP26C1Q6V0L0 522 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 WRNIP1Q96S55 665 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 NHEJ1Q9H9Q4 299 aaPredicted RBP11.51□□□□□ -0.57
SAMM50-206ENST00000494795 ARHGAP20Q9P2F6 1191 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 KDM3AQ9Y4C1 1321 aa11.51□□□□□ -0.57
SAMM50-206ENST00000494795 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 LRRC53A6NM62 1247 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 FZD9O00144 591 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms