RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 MAN1B1Q9UKM7 699 aa3□□□□□ -1.93
MDC1-208ENST00000494654 ITGB1BP2Q9UKP3 347 aa3□□□□□ -1.93
MDC1-208ENST00000494654 WDR3Q9UNX4 943 aaKnown RBP eCLIP3□□□□□ -1.93
MDC1-208ENST00000494654 ZNF510Q9Y2H8 683 aa3□□□□□ -1.93
MDC1-208ENST00000494654 LEMD3Q9Y2U8 911 aa3□□□□□ -1.93
MDC1-208ENST00000494654 TMED5Q9Y3A6 229 aa3□□□□□ -1.93
MDC1-208ENST00000494654 C2CD2Q9Y426 696 aa3□□□□□ -1.93
MDC1-208ENST00000494654 NFE2L3Q9Y4A8 694 aa3□□□□□ -1.93
MDC1-208ENST00000494654 HYOU1Q9Y4L1 999 aa3□□□□□ -1.93
MDC1-208ENST00000494654 EP400Q96L91 3159 aa3□□□□□ -1.93
MDC1-208ENST00000494654 DOCK1Q14185 1865 aa3□□□□□ -1.93
MDC1-208ENST00000494654 ATRNO75882 1429 aa3□□□□□ -1.93
MDC1-208ENST00000494654 PTPRUQ92729 1446 aa3□□□□□ -1.93
MDC1-208ENST00000494654 CICQ96RK0 1608 aaPredicted RBP3□□□□□ -1.93
MDC1-208ENST00000494654 NUP98P52948 1817 aa3□□□□□ -1.93
MDC1-208ENST00000494654 COL15A1P39059 1388 aa3□□□□□ -1.93
MDC1-208ENST00000494654 PTPRFP10586 1907 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 SOS2Q07890 1332 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 WDR19Q8NEZ3 1342 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 STK36Q9NRP7 1315 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 BRWD3Q6RI45 1802 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 A0A0D9SFI3 127 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 A0A0U1RQJ8 604 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 RBM47A0AV96 593 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 GRID2IPA4D2P6 1211 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 GMNCA6NCL1 334 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 A6NJR5 290 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ZNF233A6NK53 670 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 O00370 1275 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ELL2O00472 640 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 BIRC5O15392 142 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PPIP5K2O43314 1243 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ORC4O43929 436 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 RAD21O60216 631 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 DIAPH2O60879 1101 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 E2F6O75461 281 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 TRIM37O94972 964 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 NDUFA10O95299 355 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CTDNEP1O95476 244 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 OAS1P00973 400 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 TFRCP02786 760 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 HMOX1P09601 288 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CSB-PGBD3P0DP91 1061 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PRLRP16471 622 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ZFXP17010 805 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 ZNF24P17028 368 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 TCP1P17987 556 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 IBSPP21815 317 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 DRD4P21917 467 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CYLC1P35663 651 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 GJA8P48165 433 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PIP4K2AP48426 406 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 ALDH5A1P51649 535 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 PSMD7P51665 324 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 INHBCP55103 352 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 NCALDP61601 193 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 HERVK_113P62684 666 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PPP2R2AP63151 447 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ZBED6P86452 979 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 GUCY1A3Q02108 690 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 KIF23Q02241 960 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 CEBPZQ03701 1054 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 PDE4BQ07343 736 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 KLC1Q07866 573 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 RBL2Q08999 1139 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ADAM9Q13443 819 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PNOCQ13519 176 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PRPF4BQ13523 1007 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 MTMR3Q13615 1198 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 MORC3Q14149 939 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 TAF7Q15545 349 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 TSNAXIP1Q2TAA8 658 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 USH1GQ495M9 461 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 Q4G0T1 1027 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CCDC92Q53HC0 331 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 OXLD1Q5BKU9 147 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 SPDYCQ5MJ68 293 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 SH2D4BQ5SQS7 431 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 SFMBT2Q5VUG0 894 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ANO1Q5XXA6 986 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ANO7Q6IWH7 933 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 MRPL14Q6P1L8 145 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 RUFY4Q6ZNE9 571 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 Q6ZVU0 165 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 MAATS1Q7Z4T9 603 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ERICH1Q86X53 443 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 RNF135Q8IUD6 432 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 IQCKQ8N0W5 287 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ARHGAP18Q8N392 663 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 FBXL16Q8N461 479 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ANKS4BQ8N8V4 417 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 WDR66Q8TBY9 1149 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 AIDAQ96BJ3 306 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CENPTQ96BT3 561 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 ZNF274Q96GC6 653 aaPredicted RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 PHACTR3Q96KR7 559 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 IFT74Q96LB3 600 aa2.99□□□□□ -1.93
MDC1-208ENST00000494654 CCDC43Q96MW1 224 aaKnown RBP2.99□□□□□ -1.93
MDC1-208ENST00000494654 GDAP1L1Q96MZ0 367 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms