RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 FOXD4L3Q6VB84 417 aaPredicted RBP12.58□□□□□ -0.39
APTX-230ENST00000494649 ETNPPLQ8TBG4 499 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 SEPT1Q8WYJ6 367 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 GLG1Q92896 1179 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 TMEM60Q9H2L4 133 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.39
APTX-230ENST00000494649 PCDHB6Q9Y5E3 794 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 ALPK3Q96L96 1907 aa12.58□□□□□ -0.39
APTX-230ENST00000494649 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
APTX-230ENST00000494649 BACH1O14867 736 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 NEMFO60524 1076 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 TOB1P50616 345 aaPredicted RBP12.58□□□□□ -0.4
APTX-230ENST00000494649 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
APTX-230ENST00000494649 MFSD10Q14728 455 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 TTC38Q5R3I4 469 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 HAS1Q92839 578 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 TRPV6Q9H1D0 765 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 NFASCO94856 1347 aa12.58□□□□□ -0.4
APTX-230ENST00000494649 H3BRB1 525 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 ARVCFO00192 962 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 TXKP42681 527 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 PSEN2P49810 448 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 SWSAP1Q6NVH7 229 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 CCDC60Q8IWA6 550 aaPredicted RBP12.57□□□□□ -0.4
APTX-230ENST00000494649 SLC5A5Q92911 643 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 ZBTB10Q96DT7 871 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 MBOAT7Q96N66 472 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 PCYT2Q99447 389 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 TEKT3Q9BXF9 490 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 RNPEPQ9H4A4 650 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 TUT1Q9H6E5 874 aaKnown RBP12.57□□□□□ -0.4
APTX-230ENST00000494649 ELP1O95163 1332 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 STX6O43752 255 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 B4GALT4O60513 344 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 F2P00734 622 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
APTX-230ENST00000494649 HIC1Q14526 733 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 CALCRLQ16602 461 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 C7orf31Q8N865 590 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
APTX-230ENST00000494649 KCNMB3Q9NPA1 279 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 TBC1D22BQ9NU19 505 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
APTX-230ENST00000494649 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
APTX-230ENST00000494649 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 LAMA3Q16787 3333 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 PSMD10O75832 226 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 CABYRO75952 493 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 CYP2C9P11712 490 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 PDCP20941 246 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 IGBP1P78318 339 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 NCAPH2Q6IBW4 605 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
APTX-230ENST00000494649 EML1O00423 815 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 KPNA6O60684 536 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 CEBPZQ03701 1054 aaKnown RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 FAAP100Q0VG06 881 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 SNX17Q15036 470 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 UGCGQ16739 394 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 GDF6Q6KF10 455 aaPredicted RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 ABHD15Q6UXT9 468 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 FAM126BQ8IXS8 530 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 SH2D3AQ9BRG2 576 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 DISC1Q9NRI5 854 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 SETD4Q9NVD3 440 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 GABBR1Q9UBS5 961 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 CEP290O15078 2479 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 POTEMA6NI47 508 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 SMIM10L2AP0DMW4 78 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 SMIM10L2BP0DMW5 78 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 CAPN2P17655 700 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 ITGB8P26012 769 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 CDK7P50613 346 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 STAT5BP51692 787 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 KRT76Q01546 638 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 BECN1Q14457 450 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 MIER3Q7Z3K6 550 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 BANK1Q8NDB2 785 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 RIT2Q99578 217 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 TTC12Q9H892 705 aaPredicted RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 ZNF302Q9NR11 478 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 VAV3Q9UKW4 847 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
APTX-230ENST00000494649 LAMA2P24043 3122 aaKnown RBP12.55□□□□□ -0.4
APTX-230ENST00000494649 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
APTX-230ENST00000494649 TMEM150BA6NC51 233 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms