RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 VPS11Q9H270 941 aa6.43□□□□□ -1.38
SMC4-224ENST00000494612 NGRNQ9NPE2 291 aaKnown RBP6.43□□□□□ -1.38
SMC4-224ENST00000494612 ENPP3O14638 875 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 CAPNS1P04632 268 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 FGFR1P11362 822 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 ZNF28P17035 718 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 RPL11P62913 178 aaKnown RBP6.42□□□□□ -1.38
SMC4-224ENST00000494612 TESK1Q15569 626 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 E4F1Q66K89 784 aaPredicted RBP6.42□□□□□ -1.38
SMC4-224ENST00000494612 DENND5AQ6IQ26 1287 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 KREMEN2Q8NCW0 462 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 KCTD13Q8WZ19 329 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 MBD6Q96DN6 1003 aa6.42□□□□□ -1.38
SMC4-224ENST00000494612 SCG5P05408 212 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 BCL6P41182 706 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 GYS2P54840 703 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 CDSNQ15517 529 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 NTRK3Q16288 839 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 LONRF2Q1L5Z9 754 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 KCNT2Q6UVM3 1135 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 DHX37Q8IY37 1157 aaKnown RBP6.41□□□□□ -1.38
SMC4-224ENST00000494612 PCED1AQ9H1Q7 454 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 PPP4R1LQ9P1A2 415 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 NDOR1Q9UHB4 597 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 ZNF652Q9Y2D9 606 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 TRAF6Q9Y4K3 522 aa6.41□□□□□ -1.38
SMC4-224ENST00000494612 ANKRD62A6NC57 917 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 GTF2A2P52657 109 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 SUMO1P63165 101 aaKnown RBP6.4□□□□□ -1.38
SMC4-224ENST00000494612 NKX3-2P78367 333 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 TCEA2Q15560 299 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 PPIL6Q8IXY8 311 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 RCBTB1Q8NDN9 531 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 DIO2Q92813 273 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 TRMT2BQ96GJ1 504 aaKnown RBP6.4□□□□□ -1.38
SMC4-224ENST00000494612 CCDC140Q96MF4 163 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.38
SMC4-224ENST00000494612 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 ZNF747Q9BV97 191 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 FBXL7Q9UJT9 491 aa6.4□□□□□ -1.38
SMC4-224ENST00000494612 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 TADA3O75528 432 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 CPP00450 1065 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 LCP1P13796 627 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 IL13P35225 146 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
SMC4-224ENST00000494612 SURF1Q15526 300 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 PKN3Q6P5Z2 889 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 ARRDC4Q8NCT1 418 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 SLKQ9H2G2 1235 aaPredicted RBP6.39□□□□□ -1.39
SMC4-224ENST00000494612 NCOA5Q9HCD5 579 aaKnown RBP6.39□□□□□ -1.39
SMC4-224ENST00000494612 CD248Q9HCU0 757 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 ASXL2Q76L83 1435 aa6.39□□□□□ -1.39
SMC4-224ENST00000494612 HGSO14964 777 aaPredicted RBP6.38□□□□□ -1.39
SMC4-224ENST00000494612 MEFVO15553 781 aaPredicted RBP6.38□□□□□ -1.39
SMC4-224ENST00000494612 MAP4K2Q12851 820 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 KCNAB2Q13303 367 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 PABPC4Q13310 644 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMC4-224ENST00000494612 ZC3H12BQ5HYM0 836 aaKnown RBP6.38□□□□□ -1.39
SMC4-224ENST00000494612 SLC35F1Q5T1Q4 408 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 ACBD5Q5T8D3 534 aaPredicted RBP6.38□□□□□ -1.39
SMC4-224ENST00000494612 DNERQ8NFT8 737 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 SLC7A14Q8TBB6 771 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 TOE1Q96GM8 510 aaKnown RBP6.38□□□□□ -1.39
SMC4-224ENST00000494612 C1orf159Q96HA4 380 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 TMEM169Q96HH4 297 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 WASF3Q9UPY6 502 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 HS3ST3A1Q9Y663 406 aa6.38□□□□□ -1.39
SMC4-224ENST00000494612 TCRBV5S2A0A599 114 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 H7BY64 318 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 MSCO60682 206 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 LRG1P02750 347 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 AMHP03971 560 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 C6orf222P0C671 652 aaPredicted RBP6.37□□□□□ -1.39
SMC4-224ENST00000494612 ICAM4Q14773 271 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 EMC4Q5J8M3 183 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 PRAMEF18Q5VWM3 479 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 TEPPQ6URK8 271 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 KIAA0907Q7Z7F0 614 aaPredicted RBP6.37□□□□□ -1.39
SMC4-224ENST00000494612 CHAMP1Q96JM3 812 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 FEZ1Q99689 392 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 PHF20Q9BVI0 1012 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 SLC52A2Q9HAB3 445 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 DTLQ9NZJ0 730 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 PCDHA9Q9Y5H5 950 aa6.37□□□□□ -1.39
SMC4-224ENST00000494612 CCDC163A0A0D9SF12 145 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 PLD2O14939 933 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 GPR42O15529 346 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 MYO1BO43795 1136 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 SDSP20132 328 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 LTBRP36941 435 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 EPHB4P54760 987 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 LSAMPQ13449 338 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 DALRD3Q5D0E6 543 aaKnown RBP6.36□□□□□ -1.39
SMC4-224ENST00000494612 CNNM4Q6P4Q7 775 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 FGD2Q7Z6J4 655 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 KLC2Q9H0B6 622 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 TMEM168Q9H0V1 697 aa6.36□□□□□ -1.39
SMC4-224ENST00000494612 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms