RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 FANCLQ9NW38 375 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 KCND2Q9NZV8 630 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 KIAA1024Q9UPX6 916 aa7.6□□□□□ -1.19
MSH5-217ENST00000494458 PFASO15067 1338 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 E9PMD0 336 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 TRAF5O00463 557 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 ATG7O95352 703 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 TPM3P06753 285 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 PLA2G4BP0C869 781 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 ZBTB48P10074 688 aaPredicted RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 ATP1A3P13637 1013 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 PBX1P40424 430 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 ZNF131P52739 623 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 MCCD1P59942 119 aaPredicted RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 PSMC6P62333 389 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 FANCCQ00597 558 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 STK4Q13043 487 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 NR1I3Q14994 352 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 Q3C1V9 767 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 EAPPQ56P03 285 aaPredicted RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 LRCH2Q5VUJ6 765 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 CST9Q5W186 159 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 MAP1SQ66K74 1059 aaPredicted RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 TTI2Q6NXR4 508 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 C1orf186Q6ZWK4 172 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 IRF2BP1Q8IU81 584 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 ZC3H3Q8IXZ2 948 aaKnown RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 GUF1Q8N442 669 aaKnown RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 KIAA0895Q8NCT3 520 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 TMEM174Q8WUU8 243 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 DDX12PQ92771 950 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 KCNN1Q92952 543 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 SLC10A4Q96EP9 437 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 ZNF577Q9BSK1 485 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 UNC45AQ9H3U1 944 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 TXNRD2Q9NNW7 524 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 INTS13Q9NVM9 706 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 MORF4L1Q9UBU8 362 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 DNM3Q9UQ16 869 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 NFE2L3Q9Y4A8 694 aa7.59□□□□□ -1.19
MSH5-217ENST00000494458 COL11A1P12107 1806 aaPredicted RBP7.59□□□□□ -1.19
MSH5-217ENST00000494458 RBBP6Q7Z6E9 1792 aaKnown RBP7.59□□□□□ -1.2
MSH5-217ENST00000494458 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 GAS7O60861 476 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 ATP9AO75110 1047 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 EIF3JO75822 258 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 STBD1O95210 358 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 CETPP11597 493 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 KCNA2P16389 499 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 CCNE1P24864 410 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 CCND2P30279 289 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 GTF2A2P52657 109 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 PAK1Q13153 545 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 GIT2Q14161 759 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 BMT2Q1RMZ1 405 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 ZCWPW2Q504Y3 356 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 NSMFQ6X4W1 530 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 EPM2AIP1Q7L775 607 aaPredicted RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 ANKRD23Q86SG2 305 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 C4orf19Q8IY42 314 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 PLCD3Q8N3E9 789 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 CDHR1Q96JP9 859 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 FGD4Q96M96 766 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 PURBQ96QR8 312 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 PLIN2Q99541 437 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 DUSP9Q99956 384 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 STRA6Q9BX79 667 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 TEKT3Q9BXF9 490 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 MOV10L1Q9BXT6 1211 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 TRIM5Q9C035 493 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 GBA2Q9HCG7 927 aaPredicted RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 ZCCHC17Q9NP64 241 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 SAMSN1Q9NSI8 373 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 RGL1Q9NZL6 768 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 WRAP73Q9P2S5 460 aaPredicted RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 IMPACTQ9P2X3 320 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 ADD3Q9UEY8 706 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 LIMA1Q9UHB6 759 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 DBR1Q9UK59 544 aaKnown RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 GDAQ9Y2T3 454 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 CTDP1Q9Y5B0 961 aaPredicted RBP7.58□□□□□ -1.2
MSH5-217ENST00000494458 LCTP09848 1927 aa7.58□□□□□ -1.2
MSH5-217ENST00000494458 IGKV6D-21A0A0A0MT36 114 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 SOWAHBA6NEL2 793 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 MARCH6O60337 910 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 CCNE2O96020 404 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 TGFB3P10600 412 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 FCER1AP12319 257 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 EIF2AK2P19525 551 aaKnown RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 OSBPP22059 807 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 GUCY2CP25092 1073 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 SFNP31947 248 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 PMS1P54277 932 aaKnown RBP7.57□□□□□ -1.2
MSH5-217ENST00000494458 TPM4P67936 248 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 UBXN2AP68543 259 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 KRT76Q01546 638 aa7.57□□□□□ -1.2
MSH5-217ENST00000494458 PDE4DQ08499 809 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms