RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 USP45Q70EL2 814 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 VN1R5Q7Z5H4 357 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 LCA5Q86VQ0 697 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 CMIPQ8IY22 773 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 ARHGEF39Q8N4T4 335 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 ADAMTS18Q8TE60 1221 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 PHKBQ93100 1093 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 ACSF2Q96CM8 615 aaPredicted RBP7.85□□□□□ -1.15
SNX13-210ENST00000494402 CCDC34Q96HJ3 373 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 GMCL1Q96IK5 515 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 TREX2Q9BQ50 279 aaPredicted RBP7.85□□□□□ -1.15
SNX13-210ENST00000494402 TIMMDC1Q9NPL8 285 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 OXSMQ9NWU1 459 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 NFKBIL1Q9UBC1 381 aaPredicted RBP7.85□□□□□ -1.15
SNX13-210ENST00000494402 SYNPO2Q9UMS6 1093 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 SOX13Q9UN79 622 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 COQ6Q9Y2Z9 468 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 NOC2LQ9Y3T9 749 aaKnown RBP7.85□□□□□ -1.15
SNX13-210ENST00000494402 ZNF451Q9Y4E5 1061 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 LOC102724428A0A0B4J2F2 783 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 TSPY2A6NKD2 308 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 NCK2O43639 380 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 DTNBO60941 627 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 BAG2O95816 211 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 TBX18O95935 607 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 SCG5P05408 212 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 TSPY3P0CV98 308 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 TSPY8P0CW00 308 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 ESRRAP11474 423 aaPredicted RBP7.84□□□□□ -1.15
SNX13-210ENST00000494402 ITGA4P13612 1032 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 XBP1P17861 261 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 STAT1P42224 750 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 SIK1P57059 783 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 TSPY1Q01534 308 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 POLD3Q15054 466 aaPredicted RBP7.84□□□□□ -1.15
SNX13-210ENST00000494402 CNN3Q15417 329 aaKnown RBP7.84□□□□□ -1.15
SNX13-210ENST00000494402 GLIPR1L2Q4G1C9 344 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 RILPL1Q5EBL4 403 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 CCDC129Q6ZRS4 1044 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 TMTC1Q8IUR5 882 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 SYTL1Q8IYJ3 562 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 ARL10Q8N8L6 244 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 C1orf159Q96HA4 380 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 NT5C1BQ96P26 610 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
SNX13-210ENST00000494402 ZFYVE21Q9BQ24 234 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 BTBD1Q9H0C5 482 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.84□□□□□ -1.15
SNX13-210ENST00000494402 NKX2-4Q9H2Z4 354 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 CXorf56Q9H5V9 222 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 POLMQ9NP87 494 aaPredicted RBP7.84□□□□□ -1.15
SNX13-210ENST00000494402 VPS45Q9NRW7 570 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 IRAK4Q9NWZ3 460 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 GPR34Q9UPC5 381 aa7.84□□□□□ -1.15
SNX13-210ENST00000494402 PRAMEF27A3QJZ7 478 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 A6NLC8 198 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 F5H0A9 414 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 NRG2O14511 850 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 FRS3O43559 492 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 MAN1A2O60476 641 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ZBED4O75132 1171 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 PPFIA3O75145 1194 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 UBOX5O94941 541 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 SMPD1P17405 629 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 CD247P20963 164 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 GBP1P32455 592 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 LSP1P33241 339 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ZNF131P52739 623 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ANO6Q4KMQ2 910 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 CFAP58Q5T655 872 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 KCNT2Q6UVM3 1135 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 FTSJ3Q8IY81 847 aaKnown RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 CACNA2D3Q8IZS8 1091 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 VWA5B2Q8N398 1253 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ADCY4Q8NFM4 1077 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 IPO4Q8TEX9 1081 aaKnown RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 BRF1Q92994 677 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ZNF622Q969S3 477 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNX13-210ENST00000494402 STK31Q9BXU1 1019 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 MRPL9Q9BYD2 267 aaKnown RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 ZFAND3Q9H8U3 227 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ZNF277Q9NRM2 450 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 KRT82Q9NSB4 513 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 ARGLU1Q9NWB6 273 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 H2AFY2Q9P0M6 372 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 CGGBP1Q9UFW8 167 aaPredicted RBP7.83□□□□□ -1.16
SNX13-210ENST00000494402 PCDHGB2Q9Y5G2 931 aa7.83□□□□□ -1.16
SNX13-210ENST00000494402 B4DLN1 442 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 FOXN3O00409 490 aaPredicted RBP7.82□□□□□ -1.16
SNX13-210ENST00000494402 FFAR2O15552 330 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 TGM5O43548 720 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 DKC1O60832 514 aaKnown RBP eCLIP7.82□□□□□ -1.16
SNX13-210ENST00000494402 GHRHP01286 108 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 CKMP06732 381 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 IDEP14735 1019 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 PDCP20941 246 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 C5AR1P21730 350 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 ECI1P42126 302 aa7.82□□□□□ -1.16
SNX13-210ENST00000494402 AGFG1P52594 562 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms