RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	AZI2	Q9H6S1	392 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	BCAS3	Q9H6U6	928 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	NOL7	Q9UMY1	257 aa	Known RBP	11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	EMSY	Q7Z589	1322 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	FAM205C	A6NFA0	338 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	DDX39A	O00148	427 aa	Known RBP	11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	TBX3	O15119	743 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	CLTB	P09497	229 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	SUPT20HL2	P0C7V6	817 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	U2AF2	P26368	475 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	TRAPPC10	P48553	1259 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	PSEN2	P49810	448 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	CHMP4BP1	P59074	171 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	ACTR2	P61160	394 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	ORC2	Q13416	577 aa	Predicted RBP	11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	KIAA0753	Q2KHM9	967 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	NBPF20	Q3BBV1	942 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	FAM47C	Q5HY64	1035 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	EARS2	Q5JPH6	523 aa	Known RBP	11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	LRCH2	Q5VUJ6	765 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	LARP1B	Q659C4	914 aa	Known RBP	11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	MIS18BP1	Q6P0N0	1132 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	SESTD1	Q86VW0	696 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	FAM126B	Q8IXS8	530 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	SLFN12	Q8IYM2	578 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	KAT2B	Q92831	832 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	SLC5A5	Q92911	643 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	FAM20A	Q96MK3	541 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	TEKT3	Q9BXF9	490 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	SMARCAD1	Q9H4L7	1026 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	ERAP1	Q9NZ08	941 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	GRIN2D	O15399	1336 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	KAT6A	Q92794	2004 aa		11.3	□□□□□ -0.6
MACF1-222	ENST00000494012	GSTTP1	A0A1W2PQM5	241 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	WDR64	B1ANS9	1081 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	HAS3	O00219	553 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	DHX15	O43143	795 aa	Known RBP	11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	SLC37A4	O43826	429 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	EDIL3	O43854	480 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	MARCH6	O60337	910 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	NEMF	O60524	1076 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	BAG4	O95429	457 aa	Known RBP	11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	SFN	P31947	248 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	SLC26A2	P50443	739 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	JAK3	P52333	1124 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	UTP14C	Q5TAP6	766 aa	Known RBP	11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	FAM160B1	Q5W0V3	765 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	MCTP1	Q6DN14	999 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	ETNPPL	Q8TBG4	499 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	GLG1	Q92896	1179 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	TNPO1	Q92973	898 aa	Known RBP	11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	KCNMB3	Q9NPA1	279 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	PDLIM7	Q9NR12	457 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	NOD1	Q9Y239	953 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012	TANC1	Q9C0D5	1861 aa		11.29	□□□□□ -0.6
MACF1-222	ENST00000494012		H0YGN5	161 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	BACH1	O14867	736 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	B4GALT4	O60513	344 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	LGR5	O75473	907 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	ATG7	O95352	703 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	CCNE2	O96020	404 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	CD4	P01730	458 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	PSAP	P07602	524 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	GNAT1	P11488	350 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	PDIA4	P13667	645 aa	Known RBP	11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	FAAP100	Q0VG06	881 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	HABP4	Q5JVS0	413 aa	Known RBP	11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	PLPPR4	Q7Z2D5	763 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	TRIM50	Q86XT4	487 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	POTED	Q86YR6	584 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	RDM1	Q8NG50	284 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	TMEM39A	Q9NV64	488 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	RNF216	Q9NWF9	866 aa	Predicted RBP	11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	GTF2IRD1	Q9UHL9	959 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	SAMM50	Q9Y512	469 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	PCDHA10	Q9Y5I2	948 aa		11.28	□□□□□ -0.6
MACF1-222	ENST00000494012	IGKV6D-21	A0A0A0MT36	114 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	VPS37C	A5D8V6	355 aa	Predicted RBP	11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	KIF28P	B7ZC32	967 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	KIAA0355	O15063	1070 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	PSMD10	O75832	226 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	MCM7	P33993	719 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	STAT5B	P51692	787 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	CALCRL	Q16602	461 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	PTGIS	Q16647	500 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	RILPL1	Q5EBL4	403 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	TTC38	Q5R3I4	469 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	ABHD15	Q6UXT9	468 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	CCDC155	Q8N6L0	562 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	AFAP1L1	Q8TED9	768 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	UIMC1	Q96RL1	719 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	TRPV6	Q9H1D0	765 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	ZNF302	Q9NR11	478 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	TRMT13	Q9NUP7	481 aa	Known RBP	11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	HDAC6	Q9UBN7	1215 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	TBX21	Q9UL17	535 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	TELO2	Q9Y4R8	837 aa		11.27	□□□□□ -0.61

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