RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CIITAP33076 1130 aa25.76■■□□□ 1.71
SNIP1-203ENST00000493916 SETQ01105 290 aaPredicted RBP25.76■■□□□ 1.71
SNIP1-203ENST00000493916 HIC1Q14526 733 aa25.76■■□□□ 1.71
SNIP1-203ENST00000493916 ME3Q16798 604 aa25.76■■□□□ 1.71
SNIP1-203ENST00000493916 UTP14CQ5TAP6 766 aaKnown RBP25.76■■□□□ 1.71
SNIP1-203ENST00000493916 HERVK_113Q902F9 699 aa25.76■■□□□ 1.71
SNIP1-203ENST00000493916 GTF3C6Q969F1 213 aa25.76■■□□□ 1.71
SNIP1-203ENST00000493916 AIFM3Q96NN9 605 aa25.76■■□□□ 1.71
SNIP1-203ENST00000493916 EMSYQ7Z589 1322 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 C17orf102A2RUQ5 167 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 M0R2N6 131 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 LARGE1O95461 756 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 CTDNEP1O95476 244 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 NPY5RQ15761 445 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 PLA2G4DQ86XP0 818 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 C22orf23Q9BZE7 217 aa25.75■■□□□ 1.71
SNIP1-203ENST00000493916 FGBP02675 491 aa25.74■■□□□ 1.71
SNIP1-203ENST00000493916 ZNF200P98182 395 aaPredicted RBP25.74■■□□□ 1.71
SNIP1-203ENST00000493916 TRIM71Q2Q1W2 868 aaKnown RBP25.74■■□□□ 1.71
SNIP1-203ENST00000493916 SERINC5Q86VE9 423 aa25.74■■□□□ 1.71
SNIP1-203ENST00000493916 BLIDQ8IZY5 108 aa25.74■■□□□ 1.71
SNIP1-203ENST00000493916 MTIF3Q9H2K0 278 aaKnown RBP25.74■■□□□ 1.71
SNIP1-203ENST00000493916 ERAP1Q9NZ08 941 aa25.74■■□□□ 1.71
SNIP1-203ENST00000493916 LGR5O75473 907 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 GNAT1P11488 350 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 SELPP16109 830 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 ACTR2P61160 394 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 FAM109BQ6ICB4 259 aaPredicted RBP25.73■■□□□ 1.71
SNIP1-203ENST00000493916 NECAB1Q8N987 351 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 ATP6V0A1Q93050 837 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 RNPEPQ9H4A4 650 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 SMARCAD1Q9H4L7 1026 aa25.73■■□□□ 1.71
SNIP1-203ENST00000493916 PARNO95453 639 aaKnown RBP25.72■■□□□ 1.71
SNIP1-203ENST00000493916 CKBP12277 381 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 XBP1P17861 261 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 USP11P51784 963 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 LRRC8DQ7L1W4 858 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 WASF1Q92558 559 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 WNT8BQ93098 351 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 KIF2CQ99661 725 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 PHF20Q9BVI0 1012 aa25.72■■□□□ 1.71
SNIP1-203ENST00000493916 ORC3Q9UBD5 711 aaPredicted RBP25.72■■□□□ 1.71
SNIP1-203ENST00000493916 NRCAMQ92823 1304 aa25.71■■□□□ 1.71
SNIP1-203ENST00000493916 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.71■■□□□ 1.71
SNIP1-203ENST00000493916 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.71■■□□□ 1.71
SNIP1-203ENST00000493916 IPO5O00410 1097 aaKnown RBP25.71■■□□□ 1.71
SNIP1-203ENST00000493916 DHX15O43143 795 aaKnown RBP25.71■■□□□ 1.71
SNIP1-203ENST00000493916 RBM25P49756 843 aaKnown RBP25.71■■□□□ 1.71
SNIP1-203ENST00000493916 DEFB128Q7Z7B8 93 aa25.71■■□□□ 1.71
SNIP1-203ENST00000493916 GLG1Q92896 1179 aa25.71■■□□□ 1.71
SNIP1-203ENST00000493916 LENG9Q96B70 501 aa25.71■■□□□ 1.71
SNIP1-203ENST00000493916 PCYT2Q99447 389 aa25.71■■□□□ 1.71
SNIP1-203ENST00000493916 ZNF577Q9BSK1 485 aa25.71■■□□□ 1.71
SNIP1-203ENST00000493916 EDIL3O43854 480 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 ATG7O95352 703 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 ADAM17P78536 824 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 PRR16Q569H4 304 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 TRAF7Q6Q0C0 670 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 OTOP2Q7RTS6 562 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 DEFB123Q8N688 67 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 TBCKQ8TEA7 893 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 LMBR1Q8WVP7 490 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 AZI2Q9H6S1 392 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 TBC1D22BQ9NU19 505 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 SETD4Q9NVD3 440 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 CXXC1Q9P0U4 656 aaPredicted RBP25.7■■□□□ 1.7
SNIP1-203ENST00000493916 KCNJ14Q9UNX9 436 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 SCN5AQ14524 2016 aa25.7■■□□□ 1.7
SNIP1-203ENST00000493916 TREHO43280 583 aa25.69■■□□□ 1.7
SNIP1-203ENST00000493916 CCNE2O96020 404 aa25.69■■□□□ 1.7
SNIP1-203ENST00000493916 PLPPR4Q7Z2D5 763 aa25.69■■□□□ 1.7
SNIP1-203ENST00000493916 NSUN7Q8NE18 718 aaKnown RBP25.69■■□□□ 1.7
SNIP1-203ENST00000493916 LIMCH1Q9UPQ0 1083 aa25.69■■□□□ 1.7
SNIP1-203ENST00000493916 IGKV6D-21A0A0A0MT36 114 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 CAND2O75155 1236 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 ACTN1P12814 892 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 FDPSP14324 419 aaKnown RBP25.68■■□□□ 1.7
SNIP1-203ENST00000493916 MARK3P27448 753 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 GPNMBQ14956 572 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 ZNF618Q5T7W0 954 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 Q7L0L9 218 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 KRT25Q7Z3Z0 450 aa25.68■■□□□ 1.7
SNIP1-203ENST00000493916 DDX39AO00148 427 aaKnown RBP25.67■■□□□ 1.7
SNIP1-203ENST00000493916 CXCL10P02778 98 aa25.67■■□□□ 1.7
SNIP1-203ENST00000493916 ST3GAL1Q11201 340 aa25.67■■□□□ 1.7
SNIP1-203ENST00000493916 PPFIA1Q13136 1202 aa25.67■■□□□ 1.7
SNIP1-203ENST00000493916 NONOQ15233 471 aaKnown RBP eCLIP25.67■■□□□ 1.7
SNIP1-203ENST00000493916 ABHD15Q6UXT9 468 aa25.67■■□□□ 1.7
SNIP1-203ENST00000493916 TMEM265A0A087WTH1 108 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 CYP3A7-CYP3A51PA0A087WV96 503 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 DTNBO60941 627 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 CYP3A7P24462 503 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 THPOP40225 353 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 SLC26A2P50443 739 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 STAT5BP51692 787 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 KRT76Q01546 638 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 GRIK4Q16099 956 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 Q4G0T1 1027 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 ZNF697Q5TEC3 545 aa25.66■■□□□ 1.7
SNIP1-203ENST00000493916 ZNF746Q6NUN9 644 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms