RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 CALN1Q9BXU9 219 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PITPNM3Q9BZ71 974 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 INPP5FQ9Y2H2 1132 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 HECW1Q76N89 1606 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 HNRNPDLO14979 420 aaKnown RBP8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF500O60304 480 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-221ENST00000493795 DR1Q01658 176 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PPARAQ07869 468 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 WASHC5Q12768 1159 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PDIK1LQ8N165 341 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 RNF139Q8WU17 664 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ZFYVE1Q9HBF4 777 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 LZTS1Q9Y250 596 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 PHLPP2Q6ZVD8 1323 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 MEIS1O00470 390 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 DLGAP5Q15398 846 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 E2F4Q16254 413 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 LUZP2Q86TE4 346 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ANKRD13CQ8N6S4 541 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 RETREG2Q8NC44 543 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 LPIN2Q92539 896 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ULK4Q96C45 1275 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 ACCSQ96QU6 501 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 OSBPL10Q9BXB5 764 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
BRCA1-221ENST00000493795 hCG_1642624A0A1W2PR95 340 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ENC1O14682 589 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PJA2O43164 708 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PDHA1P08559 390 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 S100A5P33763 92 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 RBM6P78332 1123 aaKnown RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 OR6B2Q6IFH4 312 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 FAM180AQ6UWF9 173 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 MMS22LQ6ZRQ5 1243 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 MOSPD1Q9UJG1 213 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 THRAP3Q9Y2W1 955 aaKnown RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PCDH11XQ9BZA7 1347 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PCDH11YQ9BZA8 1340 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 GOLGA8RI6L899 631 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CIITAP33076 1130 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CCDC15Q0P6D6 951 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CUL1Q13616 776 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 TNFAIP1Q13829 316 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PPP6R3Q5H9R7 873 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 FAM47AQ5JRC9 791 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 NUGGCQ68CJ6 796 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 NIM1KQ8IY84 436 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 NFATC2IPQ8NCF5 419 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CATSPER1Q8NEC5 780 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 GJA10Q969M2 543 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 BTBD6Q96KE9 485 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 STK32BQ9NY57 414 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 SELENONQ9NZV5 590 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 MROH5Q6ZUA9 1318 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ABCC5O15440 1437 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CTIFO43310 598 aaKnown RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CMA1P23946 247 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PSMA3P25788 255 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 HOXA7P31268 230 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 COPS2P61201 443 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 NR5A1Q13285 461 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 DMC1Q14565 340 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 C16orf72Q14CZ0 275 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 TRIP13Q15645 432 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 AARS2Q5JTZ9 985 aaKnown RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ODR4Q5SWX8 454 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 KIAA1841Q6NSI8 718 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 C1orf228Q6PIY5 440 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ANKS3Q6ZW76 656 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PLBD2Q8NHP8 589 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 TTC17Q96AE7 1141 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 DSCC1Q9BVC3 393 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 FANCLQ9NW38 375 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 AKT3Q9Y243 479 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 H0Y3Z8 333 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CASP14P31944 242 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PSMD7P51665 324 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 TIMM10P62072 90 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 MYO1EQ12965 1108 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 MXD4Q14582 209 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 FBXO11Q86XK2 927 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PLD3Q8IV08 490 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF654Q8IZM8 581 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 FAF2Q96CS3 445 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 FMO2Q99518 471 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 CUEDC2Q9H467 287 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 GPBP1L1Q9HC44 474 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 LMBRD1Q9NUN5 540 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 SEL1LQ9UBV2 794 aa8.44□□□□□ -1.06
BRCA1-221ENST00000493795 PAIP2BQ9ULR5 123 aaKnown RBP8.44□□□□□ -1.06
BRCA1-221ENST00000493795 ZNF532Q9HCE3 1301 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 H0YIN7 160 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 GOLGA8MH3BSY2 632 aa8.43□□□□□ -1.06
BRCA1-221ENST00000493795 JAK2O60674 1132 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms