RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 RBM43Q6ZSC3 357 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 CPXCR1Q8N123 301 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 MICALL1Q8N3F8 863 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 CLIC6Q96NY7 704 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 MTMR9Q96QG7 549 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 CSRNP2Q9H175 543 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 ASCC2Q9H1I8 757 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 RNF146Q9NTX7 359 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 FBXO40Q9UH90 709 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 PASKQ96RG2 1323 aa8.04□□□□□ -1.12
SMARCE1-211ENST00000493660 LOXHD1Q8IVV2 1947 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TUBB4AP04350 444 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 FAM163BP0C2L3 166 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 PTGS1P23219 599 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 SYKP43405 635 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 FXR2P51116 673 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 NDUFA8P51970 172 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 FMR1Q06787 632 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 CALCRLQ16602 461 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 CST9Q5W186 159 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 RIOX2Q8IUF8 465 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 P2RX7Q99572 595 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 SRRTQ9BXP5 876 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TMEM60Q9H2L4 133 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 ACAD9Q9H845 621 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 L2HGDHQ9H9P8 463 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 KCND1Q9NSA2 647 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 DDX25Q9UHL0 483 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 LRRC37A2A6NM11 1700 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 A0A1B0GVL5 298 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 VWA3AA6NCI4 1184 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 NFIBO00712 420 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TDP2O95551 362 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 SLC25A27O95847 323 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TAL1P17542 331 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 HOXA13P31271 388 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TXLNAP40222 546 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 STAT3P40763 770 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 HERVK_113P62684 666 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 PSMD2Q13200 908 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TMEM266Q2M3C6 531 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 XRRA1Q6P2D8 792 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 NIPA1Q7RTP0 329 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 SLFN12Q8IYM2 578 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 N4BP2L2Q92802 583 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 CCDC34Q96HJ3 373 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 RAB34Q9BZG1 259 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 CCSER1Q9C0I3 900 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 TNMDQ9H2S6 317 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 GPBP1L1Q9HC44 474 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 ZCCHC17Q9NP64 241 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 KCNMB3Q9NPA1 279 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 KCNH3Q9ULD8 1083 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 STK24Q9Y6E0 443 aa8.03□□□□□ -1.12
SMARCE1-211ENST00000493660 PLXNB2O15031 1838 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 ZNFX1Q9P2E3 1918 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 TESPA1A2RU30 521 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 SLC37A4O43826 429 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 RTN2O75298 545 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 ZNF202O95125 648 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 IMPDH2P12268 514 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 RDXP35241 583 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 GRIN1Q05586 938 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 PDIA5Q14554 519 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 IL17AQ16552 155 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 PREPLQ4J6C6 727 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 RBM12BQ8IXT5 1001 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 SMC1BQ8NDV3 1235 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 SYTL5Q8TDW5 730 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 THOC1Q96FV9 657 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 FAM20AQ96MK3 541 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 HOOK1Q9UJC3 728 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 NUB1Q9Y5A7 615 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 PFASO15067 1338 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 ZNF236Q9UL36 1845 aa8.02□□□□□ -1.13
SMARCE1-211ENST00000493660 CCL15-CCL14A0A0B4J2E2 113 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 A0A1B0GUA9 196 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 CNMDO75829 334 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 CCL15Q16663 113 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 TBC1D25Q3MII6 688 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 PCNX4Q63HM2 1172 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 IGSF22Q8N9C0 903 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 SPC24Q8NBT2 197 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 SHCBP1Q8NEM2 672 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 MICAL1Q8TDZ2 1067 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 TBC1D5Q92609 795 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 SYMPKQ92797 1274 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 HHIPL1Q96JK4 782 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 CRACR2AQ9BSW2 395 aa8.01□□□□□ -1.13
SMARCE1-211ENST00000493660 SPATC1LQ9H0A9 340 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms