RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CIITAP33076 1130 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 RFC2P35250 354 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 EPHB4P54760 987 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 SETQ01105 290 aaPredicted RBP7.93□□□□□ -1.14
TOP3A-207ENST00000493648 PTK7Q13308 1070 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 C9orf50Q5SZB4 431 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 PSRC1Q6PGN9 363 aaPredicted RBP7.93□□□□□ -1.14
TOP3A-207ENST00000493648 KRT25Q7Z3Z0 450 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 DAGLBQ8NCG7 672 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 CAGE1Q8TC20 777 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 RASGRP4Q8TDF6 673 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 TBCKQ8TEA7 893 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 CRYGNQ8WXF5 182 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 GLG1Q92896 1179 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 ATP6V0A1Q93050 837 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 RNPC3Q96LT9 517 aaKnown RBP7.93□□□□□ -1.14
TOP3A-207ENST00000493648 AIFM3Q96NN9 605 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF577Q9BSK1 485 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 PHF20Q9BVI0 1012 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 SMARCAD1Q9H4L7 1026 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 AZI2Q9H6S1 392 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 TBC1D22BQ9NU19 505 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 ERAP1Q9NZ08 941 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 TCEAL9Q9UHQ7 104 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 KCNJ14Q9UNX9 436 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 UMODL1Q5DID0 1318 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 KAT6AQ92794 2004 aa7.93□□□□□ -1.14
TOP3A-207ENST00000493648 TRIP12Q14669 1992 aaPredicted RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 IGLV3-22A0A075B6J6 115 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 CCDC194A0A1B0GVG4 234 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 IPO5O00410 1097 aaKnown RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 ST18O60284 1047 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 PARNO95453 639 aaKnown RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 LARGE1O95461 756 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 PFKMP08237 780 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 IQCF3P0C7M6 154 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 SMIM10L2AP0DMW4 78 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 SMIM10L2BP0DMW5 78 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 ACRP10323 421 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 ACTN1P12814 892 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 ACTR2P61160 394 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 TRIM29Q14134 588 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 NONOQ15233 471 aaKnown RBP eCLIP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 RABEP1Q15276 862 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 PRR16Q569H4 304 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 TMEM240Q5SV17 173 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 GPR153Q6NV75 609 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF365Q70YC5 407 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 C16orf59Q7L2K0 433 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 AFAP1L1Q8TED9 768 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 SCLYQ96I15 445 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 LLPHQ9BRT6 129 aaKnown RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 WNT8AQ9H1J5 351 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 MTIF3Q9H2K0 278 aaKnown RBP7.92□□□□□ -1.14
TOP3A-207ENST00000493648 RNPEPQ9H4A4 650 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 BRMS1Q9HCU9 246 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 SETD4Q9NVD3 440 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 TELO2Q9Y4R8 837 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 NRCAMQ92823 1304 aa7.92□□□□□ -1.14
TOP3A-207ENST00000493648 TRIOBPQ9H2D6 2365 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 RRN3P2A6NIE6 340 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 M0R2N6 131 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 DDX39AO00148 427 aaKnown RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 SOX1O00570 391 aaPredicted RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 BACH1O14867 736 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 DHX15O43143 795 aaKnown RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 LGR5O75473 907 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 ATG7O95352 703 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 CKBP12277 381 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 FDPSP14324 419 aaKnown RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 SELPP16109 830 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 MARK3P27448 753 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 SLC26A2P50443 739 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 STAT5BP51692 787 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 SMAD3P84022 425 aaKnown RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF200P98182 395 aaPredicted RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 KRT76Q01546 638 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 RBL2Q08999 1139 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 ITGB3BPQ13352 177 aaPredicted RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 Q4G0T1 1027 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 FAM160B1Q5W0V3 765 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 ZNF746Q6NUN9 644 aaPredicted RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 MIS18BP1Q6P0N0 1132 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 PLPPR4Q7Z2D5 763 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 DEFB128Q7Z7B8 93 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 SERINC5Q86VE9 423 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 TRIM50Q86XT4 487 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 NSUN7Q8NE18 718 aaKnown RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 HERVK_113Q902F9 699 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 LRCH3Q96II8 777 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 RIT2Q99578 217 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 KIF2CQ99661 725 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 NAP1L4Q99733 375 aaKnown RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 FTOQ9C0B1 505 aaKnown RBP eCLIP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 SH2B1Q9NRF2 756 aaPredicted RBP7.91□□□□□ -1.14
TOP3A-207ENST00000493648 EMSYQ7Z589 1322 aa7.91□□□□□ -1.14
TOP3A-207ENST00000493648 CYP3A7-CYP3A51PA0A087WV96 503 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms