RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 TMED8Q6PL24 325 aaPredicted RBP9.14□□□□□ -0.95
GBP3-208ENST00000493594 ADAT2Q7Z6V5 191 aaKnown RBP9.14□□□□□ -0.95
GBP3-208ENST00000493594 LRRC34Q8IZ02 419 aa9.14□□□□□ -0.95
GBP3-208ENST00000493594 METTL13Q8N6R0 699 aa9.14□□□□□ -0.95
GBP3-208ENST00000493594 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
GBP3-208ENST00000493594 UHMK1Q8TAS1 419 aaKnown RBP9.14□□□□□ -0.95
GBP3-208ENST00000493594 PRCCQ92733 491 aaPredicted RBP9.14□□□□□ -0.95
GBP3-208ENST00000493594 EBF2Q9HAK2 575 aa9.14□□□□□ -0.95
GBP3-208ENST00000493594 TBC1D7Q9P0N9 293 aa9.14□□□□□ -0.95
GBP3-208ENST00000493594 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
GBP3-208ENST00000493594 NOC2LQ9Y3T9 749 aaKnown RBP9.14□□□□□ -0.95
GBP3-208ENST00000493594 MYH7BA7E2Y1 1941 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 HGSO14964 777 aaPredicted RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 OR52Z1P0C646 297 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 TRHP20396 242 aaPredicted RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 COPB2P35606 906 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 MTMR3Q13615 1198 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 ZKSCAN8Q15776 578 aaPredicted RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 LRRC55Q6ZSA7 311 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 MAB21L3Q8N8X9 362 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 ZNF483Q8TF39 744 aaPredicted RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.13□□□□□ -0.95
GBP3-208ENST00000493594 CALML4Q96GE6 196 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 SPAG5Q96R06 1193 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 PRMT1Q99873 361 aaKnown RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 TRIM51Q9BSJ1 452 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 MMTAG2Q9BU76 263 aaKnown RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 CUEDC2Q9H467 287 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 CEP72Q9P209 647 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 AGAP1Q9UPQ3 857 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 TRPC6Q9Y210 931 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 CD2APQ9Y5K6 639 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 BAZ2AQ9UIF9 1905 aaKnown RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 PCDH11XQ9BZA7 1347 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 PCDH11YQ9BZA8 1340 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 M0R2N6 131 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 PGRMC1O00264 195 aaKnown RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 FGFR1OPO95684 399 aaKnown RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 GOLGA8HP0CJ92 632 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 KIF5BP33176 963 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 PPP1R2P41236 205 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 IRX1P78414 480 aaPredicted RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 GRIK3Q13003 919 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 RNF217Q8TC41 542 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 P3H4Q92791 437 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 ZNF317Q96PQ6 595 aaPredicted RBP9.13□□□□□ -0.95
GBP3-208ENST00000493594 FAM129AQ9BZQ8 928 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 CCDC113Q9H0I3 377 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 ABCF3Q9NUQ8 709 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 STK38LQ9Y2H1 464 aa9.13□□□□□ -0.95
GBP3-208ENST00000493594 A8MUI8 341 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 STARD3NLO95772 234 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 USP11P51784 963 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 IFI35P80217 286 aaPredicted RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 PTK2Q05397 1052 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 RCSD1Q6JBY9 416 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 MAEAQ7L5Y9 396 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 TRPM8Q7Z2W7 1104 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 EGFL6Q8IUX8 553 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 NELFCDQ8IXH7 590 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 SPICE1Q8N0Z3 855 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 GUF1Q8N442 669 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 KIF2BQ8N4N8 673 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 ACTRT1Q8TDG2 376 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 ZNF570Q96NI8 536 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 NLRP3Q96P20 1036 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.12□□□□□ -0.95
GBP3-208ENST00000493594 TMOD3Q9NYL9 352 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 SAMD15Q9P1V8 674 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 SLC12A4Q9UP95 1085 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 NR2E1Q9Y466 385 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 KCPQ6ZWJ8 1503 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 A0A0G2JS52 829 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 CYTH3O43739 400 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 ACTN1P12814 892 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 CALRP27797 417 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 PRPF4BQ13523 1007 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 ASIC2Q16515 512 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 CAPRIN2Q6IMN6 1127 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 UNC13DQ70J99 1090 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 DAAM2Q86T65 1068 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 PNMA1Q8ND90 353 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 CDK5RAP3Q96JB5 506 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 PBKQ96KB5 322 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 AK8Q96MA6 479 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 TSG101Q99816 390 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 FAM167BQ9BTA0 163 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 CNOT10Q9H9A5 744 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 MAGEF1Q9HAY2 307 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 BLOC1S4Q9NUP1 217 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 THRAP3Q9Y2W1 955 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 UTP11Q9Y3A2 253 aaKnown RBP9.12□□□□□ -0.95
GBP3-208ENST00000493594 COL4A3BPQ9Y5P4 624 aa9.12□□□□□ -0.95
GBP3-208ENST00000493594 UBOX5O94941 541 aa9.11□□□□□ -0.95
GBP3-208ENST00000493594 PRPHP41219 470 aa9.11□□□□□ -0.95
GBP3-208ENST00000493594 INHBEP58166 350 aa9.11□□□□□ -0.95
GBP3-208ENST00000493594 TFAP4Q01664 338 aa9.11□□□□□ -0.95
GBP3-208ENST00000493594 LRRC63Q05C16 580 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms