RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZNF148Q9UQR1 794 aa7.47□□□□□ -1.21
VPS13B-205ENST00000493587 ESYT3A0FGR9 886 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 TRAPPC3O43617 180 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 KDM1AO60341 852 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 UBOX5O94941 541 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 KIF11P52732 1056 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 PDE1BQ01064 536 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 KCTD21Q4G0X4 260 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 IRGCQ6NXR0 463 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 KLC3Q6P597 504 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 SESTD1Q86VW0 696 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 TTC30BQ8N4P2 665 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 KCTD17Q8N5Z5 321 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 NMD3Q96D46 503 aaKnown RBP7.46□□□□□ -1.21
VPS13B-205ENST00000493587 CHMP6Q96FZ7 201 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 NAP1L3Q99457 506 aaPredicted RBP7.46□□□□□ -1.21
VPS13B-205ENST00000493587 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.21
VPS13B-205ENST00000493587 ADAM22Q9P0K1 906 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 CHPF2Q9P2E5 772 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 LARSQ9P2J5 1176 aaKnown RBP7.46□□□□□ -1.21
VPS13B-205ENST00000493587 CIDEBQ9UHD4 219 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 RCOR1Q9UKL0 485 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 FAF1Q9UNN5 650 aaPredicted RBP7.46□□□□□ -1.21
VPS13B-205ENST00000493587 NOVA2Q9UNW9 492 aaKnown RBP7.46□□□□□ -1.21
VPS13B-205ENST00000493587 SSX2IPQ9Y2D8 614 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 HEY1Q9Y5J3 304 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 BCL9O00512 1426 aa7.46□□□□□ -1.21
VPS13B-205ENST00000493587 MYH2Q9UKX2 1941 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 MACROD2A1Z1Q3 448 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 OPHN1O60890 802 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 LCA5LO95447 670 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 ITGA2BP08514 1039 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 KRT16P08779 473 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 CASP14P31944 242 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 PEX5P50542 639 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 CNPY1Q3B7I2 92 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 PHLDB3Q6NSJ2 640 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 TRIM67Q6ZTA4 783 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 MPP4Q96JB8 637 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 PAG1Q9NWQ8 432 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 TESPA1A2RU30 521 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 ZNF233A6NK53 670 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 GOLGA8AA7E2F4 631 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 NVLO15381 856 aaKnown RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 POLR3DP05423 398 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 GSTT2P0CG29 244 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 GSTT2BP0CG30 244 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 CCR3P51677 355 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 PPARAQ07869 468 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 CREB3L3Q68CJ9 461 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 CNGA4Q8IV77 575 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 FMR1NBQ8N0W7 255 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 DDX50Q9BQ39 737 aaKnown RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 FAM192AQ9GZU8 254 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 BTBD7Q9P203 1132 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 ZMYND8Q9ULU4 1186 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 TRIM33Q9UPN9 1127 aa7.46□□□□□ -1.22
VPS13B-205ENST00000493587 ARIH1Q9Y4X5 557 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-205ENST00000493587 MAGEA13PA6NCF6 341 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 SFI1A8K8P3 1242 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 MAGEB3O15480 346 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 ATP9BO43861 1147 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PEX14O75381 377 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 POTEJP0CG39 1038 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 SYKP43405 635 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 IFNAR2P48551 515 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 ST3GAL1Q11201 340 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 ZBTB17Q13105 803 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 C1orf228Q6PIY5 440 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 TRAPPC11Q7Z392 1133 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 TMTC1Q8IUR5 882 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 ENGASEQ8NFI3 743 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 UBLCP1Q8WVY7 318 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-205ENST00000493587 RAB3IPQ96QF0 476 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-205ENST00000493587 RETREG1Q9H6L5 497 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 TRPV5Q9NQA5 729 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PDP2Q9P2J9 529 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 MTUS1Q9ULD2 1270 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 ZNF609O15014 1411 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 RIC1Q4ADV7 1423 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 A0A0J9YVX5 310 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PRC1O43663 620 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 ATP9AO75110 1047 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 TACC1O75410 805 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 CTNNA1P35221 906 aaKnown RBP7.45□□□□□ -1.22
VPS13B-205ENST00000493587 HALP42357 657 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PPP2R2AP63151 447 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PHEXP78562 749 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PNOCQ13519 176 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 CYLC2Q14093 348 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-205ENST00000493587 LRP8Q14114 963 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 KRT71Q3SY84 523 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
VPS13B-205ENST00000493587 RASGRP2Q7LDG7 609 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 CYP4X1Q8N118 509 aa7.45□□□□□ -1.22
VPS13B-205ENST00000493587 DNAJC1Q96KC8 554 aaKnown RBP7.45□□□□□ -1.22
VPS13B-205ENST00000493587 PUS3Q9BZE2 481 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms