RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 BAATQ14032 418 aaPredicted RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 MAP7D1Q3KQU3 841 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 INTS6LQ5JSJ4 861 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 SYDE2Q5VT97 1194 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 DIEXFQ68CQ4 756 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 OTOP2Q7RTS6 562 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 ZNF589Q86UQ0 364 aaPredicted RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 TBC1D10CQ8IV04 446 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 CCDC82Q8N4S0 544 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 PHOSPHO2Q8TCD6 241 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 DHX38Q92620 1227 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 SCLYQ96I15 445 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 FSD1Q9BTV5 496 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 AP5M1Q9H0R1 490 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 SLC28A3Q9HAS3 691 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 HELLSQ9NRZ9 838 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 TFIP11Q9UBB9 837 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 ADD3Q9UEY8 706 aaKnown RBP8.25□□□□□ -1.09
CAB39-206ENST00000493540 PNMA2Q9UL42 364 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 STX8Q9UNK0 236 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 SLC4A7Q9Y6M7 1214 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 NEDD4P46934 1319 aa8.25□□□□□ -1.09
CAB39-206ENST00000493540 PALM3A6NDB9 673 aaPredicted RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 HAS3O00219 553 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 OPLAHO14841 1288 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 ATP9BO43861 1147 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 FGAP02671 866 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 CA3P07451 260 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 IQCF3P0C7M6 154 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 SUPT20HL2P0C7V6 817 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 HSPD1P10809 573 aaKnown RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 CYP2C9P11712 490 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 MYOGP15173 224 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 ATP2A2P16615 1042 aaKnown RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 RABGGTBP53611 331 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 SNAP25P60880 206 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 RPS6P62753 249 aaKnown RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 TAP1Q03518 808 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 ARHGAP1Q07960 439 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 NNTQ13423 1086 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 HDAC1Q13547 482 aaPredicted RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 COL19A1Q14993 1142 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 TRIM71Q2Q1W2 868 aaKnown RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 NSMFQ6X4W1 530 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 EEPD1Q7L9B9 569 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 CCDC116Q8IYX3 515 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 RPUSD2Q8IZ73 545 aaKnown RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 SCFD2Q8WU76 684 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 ANKS1AQ92625 1134 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 KAT2BQ92831 832 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 EVI5LQ96CN4 794 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 TTC14Q96N46 770 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 UHRF1Q96T88 793 aaPredicted RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 MTG1Q9BT17 334 aaPredicted RBP8.24□□□□□ -1.09
CAB39-206ENST00000493540 WDR11Q9BZH6 1224 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 MYO15AQ9UKN7 3530 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 FRMPD4Q14CM0 1322 aa8.24□□□□□ -1.09
CAB39-206ENST00000493540 NRG2O14511 850 aaPredicted RBP8.23□□□□□ -1.09
CAB39-206ENST00000493540 KPNA6O60684 536 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 F2P00734 622 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 APPP05067 770 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 SLC16A2P36021 539 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 PLA2G5P39877 138 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 PDE1AP54750 535 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 PPP2R5BQ15173 497 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 TCTN1Q2MV58 587 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 TSGA10IPQ3SY00 556 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
CAB39-206ENST00000493540 KIAA1211Q6ZU35 1233 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 SPRED2Q7Z698 418 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 HERC6Q8IVU3 1022 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 PLPP7Q8NBV4 271 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 CAGE1Q8TC20 777 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 AFAP1L1Q8TED9 768 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 MTMR8Q96EF0 704 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 FAM227BQ96M60 508 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 C11orf16Q9NQ32 467 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 LMCD1Q9NZU5 365 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 COL20A1Q9P218 1284 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 CTDP1Q9Y5B0 961 aaPredicted RBP8.23□□□□□ -1.09
CAB39-206ENST00000493540 CCDC171Q6TFL3 1326 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 RAD50Q92878 1312 aa8.23□□□□□ -1.09
CAB39-206ENST00000493540 ERVH48-1M5A8F1 160 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
CAB39-206ENST00000493540 NR3C2P08235 984 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 MMP3P08254 477 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 HSD17B4P51659 736 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 KCNQ1P51787 676 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 WDR5P61964 334 aaKnown RBP8.22□□□□□ -1.09
CAB39-206ENST00000493540 TFF2Q03403 129 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 MBTPS1Q14703 1052 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
CAB39-206ENST00000493540 RNF207Q6ZRF8 634 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 OR6J1Q8NGC5 347 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 COPS5Q92905 334 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms