RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SPATA31C2B4DYI2 1134 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 CTAGE5O15320 804 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 HSP90AA1P07900 732 aaKnown RBP13.16□□□□□ -0.3
CTSA-209ENST00000493522 CYP3A4P08684 503 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 CPT1AP50416 773 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 SETQ01105 290 aaPredicted RBP13.16□□□□□ -0.3
CTSA-209ENST00000493522 RAB30Q15771 203 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 BRDTQ58F21 947 aaPredicted RBP13.16□□□□□ -0.3
CTSA-209ENST00000493522 RASIP1Q5U651 963 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 PLA2G4DQ86XP0 818 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 DHX37Q8IY37 1157 aaKnown RBP13.16□□□□□ -0.3
CTSA-209ENST00000493522 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
CTSA-209ENST00000493522 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
CTSA-209ENST00000493522 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 H3BQV1 296 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 ZEB2O60315 1214 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 CABYRO75952 493 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 MMP3P08254 477 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 MYL3P08590 195 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 ACRP10323 421 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 TGFB3P10600 412 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 PBX2P40425 430 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 NKX3-2P78367 333 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 SP2Q02086 613 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 SP4Q02446 784 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 NEDD9Q14511 834 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 PRR16Q569H4 304 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 NEK8Q86SG6 692 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 SEZ6LQ9BYH1 1024 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 MLXIPQ9HAP2 919 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
CTSA-209ENST00000493522 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 TDP2O95551 362 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 CD4P01730 458 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 ARP10275 920 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 KCNA2P16389 499 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 CYP2C18P33260 490 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 USP11P51784 963 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 LETM2Q2VYF4 491 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 EARS2Q5JPH6 523 aaKnown RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 CELF3Q5SZQ8 465 aaKnown RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 CYFIP1Q7L576 1253 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 EMID1Q96A84 441 aaPredicted RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
CTSA-209ENST00000493522 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 UIMC1Q96RL1 719 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 HIPK3Q9H422 1215 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 PRDM12Q9H4Q4 367 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
CTSA-209ENST00000493522 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 DDX39AO00148 427 aaKnown RBP13.13□□□□□ -0.31
CTSA-209ENST00000493522 MEIS1O00470 390 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 MAFGO15525 162 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 ATP9AO75110 1047 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 CIITAP33076 1130 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 LARP1BQ659C4 914 aaKnown RBP13.13□□□□□ -0.31
CTSA-209ENST00000493522 METTL7BQ6UX53 244 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 PPTC7Q8NI37 304 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 BCAS3Q9H6U6 928 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
CTSA-209ENST00000493522 JPH1Q9HDC5 661 aaPredicted RBP13.13□□□□□ -0.31
CTSA-209ENST00000493522 TCEAL9Q9UHQ7 104 aa13.13□□□□□ -0.31
CTSA-209ENST00000493522 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
CTSA-209ENST00000493522 A6NJR5 290 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 CCNT1O60563 726 aaKnown RBP13.12□□□□□ -0.31
CTSA-209ENST00000493522 FGBP02675 491 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 PDCP20941 246 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
CTSA-209ENST00000493522 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 DGKDQ16760 1214 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 MOXD1Q6UVY6 613 aa13.12□□□□□ -0.31
CTSA-209ENST00000493522 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms