RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 RARBP10826 455 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 IL17AQ16552 155 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 TLK2Q86UE8 772 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 GIMAP8Q8ND71 665 aaPredicted RBP19.38■□□□□ 0.69
LIME1-208ENST00000493265 LEO1Q8WVC0 666 aaPredicted RBP19.38■□□□□ 0.69
LIME1-208ENST00000493265 SPATA33Q96N06 139 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 RIT2Q99578 217 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 SENP7Q9BQF6 1050 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 AP5M1Q9H0R1 490 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 UNC45AQ9H3U1 944 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 JPH1Q9HDC5 661 aaPredicted RBP19.38■□□□□ 0.69
LIME1-208ENST00000493265 SLC9A2Q9UBY0 812 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 NFASCO94856 1347 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 NOP56O00567 594 aaKnown RBP19.37■□□□□ 0.69
LIME1-208ENST00000493265 NKRFO15226 690 aaKnown RBP eCLIP19.37■□□□□ 0.697e-8■■■□□ 16.3
LIME1-208ENST00000493265 SYN1P17600 705 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 ME1P48163 572 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 MNX1P50219 401 aaPredicted RBP19.37■□□□□ 0.69
LIME1-208ENST00000493265 IRX5P78411 483 aaPredicted RBP19.37■□□□□ 0.69
LIME1-208ENST00000493265 ARHGAP1Q07960 439 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 LAMC2Q13753 1193 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 CLIC6Q96NY7 704 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 C11orf49Q9H6J7 331 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 DDX20Q9UHI6 824 aaKnown RBP19.37■□□□□ 0.69
LIME1-208ENST00000493265 VAV3Q9UKW4 847 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 GNEQ9Y223 722 aaKnown RBP19.37■□□□□ 0.69
LIME1-208ENST00000493265 SAMM50Q9Y512 469 aa19.37■□□□□ 0.69
LIME1-208ENST00000493265 POTEMA6NI47 508 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 DUSP11O75319 330 aaKnown RBP19.36■□□□□ 0.69
LIME1-208ENST00000493265 CCNE2O96020 404 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 PGK1P00558 417 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 PRPHP41219 470 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 GRIN1Q05586 938 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 METTL7BQ6UX53 244 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 KCNG4Q8TDN1 519 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 AFG1LQ8WV93 481 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 GDF15Q99988 308 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 SCAND2PQ9GZW5 306 aaPredicted RBP19.36■□□□□ 0.69
LIME1-208ENST00000493265 XPNPEP3Q9NQH7 507 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
LIME1-208ENST00000493265 RCOR1Q9UKL0 485 aa19.36■□□□□ 0.69
LIME1-208ENST00000493265 C6orf222P0C671 652 aaPredicted RBP19.35■□□□□ 0.69
LIME1-208ENST00000493265 ACTR2P61160 394 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 BEX3Q00994 111 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 KRT76Q01546 638 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 HSDL1Q3SXM5 330 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 SPECC1Q5M775 1068 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 ARL6IP4Q66PJ3 421 aaKnown RBP19.35■□□□□ 0.69
LIME1-208ENST00000493265 MIER3Q7Z3K6 550 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 KRI1Q8N9T8 703 aaKnown RBP19.35■□□□□ 0.69
LIME1-208ENST00000493265 SLC17A8Q8NDX2 589 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 OGDHLQ9ULD0 1010 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 FRMPD3Q5JV73 1810 aa19.35■□□□□ 0.69
LIME1-208ENST00000493265 ELP1O95163 1332 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 SYNRGQ9UMZ2 1314 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 TCHHQ07283 1943 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 PP2D1A8MPX8 630 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 EML1O00423 815 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 UTP14CQ5TAP6 766 aaKnown RBP19.34■□□□□ 0.69
LIME1-208ENST00000493265 FERMT2Q96AC1 680 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 CSRNP2Q9H175 543 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 SPC25Q9HBM1 224 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 DISC1Q9NRI5 854 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 LRWD1Q9UFC0 647 aa19.34■□□□□ 0.69
LIME1-208ENST00000493265 SRPRBQ9Y5M8 271 aaKnown RBP19.34■□□□□ 0.69
LIME1-208ENST00000493265 MYADML2A6NDP7 307 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 PPP6R2O75170 966 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 CDC25AP30304 524 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 FXR2P51116 673 aaKnown RBP eCLIP19.33■□□□□ 0.68
LIME1-208ENST00000493265 SPIRE1Q08AE8 756 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 PPP2R5CQ13362 524 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 ZRSR1Q15695 479 aaKnown RBP19.33■□□□□ 0.68
LIME1-208ENST00000493265 ZNF746Q6NUN9 644 aaPredicted RBP19.33■□□□□ 0.68
LIME1-208ENST00000493265 GPR20Q99678 358 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 RAB34Q9BZG1 259 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 PCDHA7Q9UN72 937 aa19.33■□□□□ 0.68
LIME1-208ENST00000493265 GSTTP1A0A1W2PQM5 241 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 WDR64B1ANS9 1081 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 BACH1O14867 736 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 MSCO60682 206 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 MYL3P08590 195 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 BMP8BP34820 402 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 TCF7P36402 384 aaPredicted RBP19.32■□□□□ 0.68
LIME1-208ENST00000493265 MAGEA10P43363 369 aaPredicted RBP19.32■□□□□ 0.68
LIME1-208ENST00000493265 JAK3P52333 1124 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 CHMP4BP1P59074 171 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 FSCN1Q16658 493 aaKnown RBP19.32■□□□□ 0.68
LIME1-208ENST00000493265 LHX8Q68G74 356 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 MIS18BP1Q6P0N0 1132 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 PPTC7Q8NI37 304 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 SEPT1Q8WYJ6 367 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 EMID1Q96A84 441 aaPredicted RBP19.32■□□□□ 0.68
LIME1-208ENST00000493265 GBP4Q96PP9 640 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 Q9Y3F1 56 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 COL6A3P12111 3177 aa19.32■□□□□ 0.68
LIME1-208ENST00000493265 CUTAO60888 179 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 PSAPP07602 524 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 MMP3P08254 477 aa19.31■□□□□ 0.68
LIME1-208ENST00000493265 SFNP31947 248 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms