RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CEP55Q53EZ4 464 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 KCNV1Q6PIU1 500 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 MOXD1Q6UVY6 613 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 NLRX1Q86UT6 975 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 VSIG10LQ86VR7 867 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 PLA2G4DQ86XP0 818 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 DHX37Q8IY37 1157 aaKnown RBP15.17■□□□□ 0.02
MSH6-208ENST00000493177 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 CRYGNQ8WXF5 182 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 MXRA8Q9BRK3 442 aa15.17■□□□□ 0.02
MSH6-208ENST00000493177 DOCK5Q9H7D0 1870 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 FAM86B1E9PN63 330 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 SLC37A4O43826 429 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 SORBS3O60504 671 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 FAM86B2P0C5J1 330 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 CYP3A7P24462 503 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
MSH6-208ENST00000493177 ORC2Q13416 577 aaPredicted RBP15.16■□□□□ 0.02
MSH6-208ENST00000493177 CALCRLQ16602 461 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 CYP2W1Q8TAV3 490 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 AFG1LQ8WV93 481 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 SPATA32Q96LK8 384 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
MSH6-208ENST00000493177 UIMC1Q96RL1 719 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 SCAND2PQ9GZW5 306 aaPredicted RBP15.16■□□□□ 0.02
MSH6-208ENST00000493177 GDPD2Q9HCC8 539 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 NOD1Q9Y239 953 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 UBIAD1Q9Y5Z9 338 aa15.16■□□□□ 0.02
MSH6-208ENST00000493177 B4GALT4O60513 344 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 STAM2O75886 525 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 YEATS4O95619 227 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 MMP3P08254 477 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 ITGB8P26012 769 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
MSH6-208ENST00000493177 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
MSH6-208ENST00000493177 PTGDRQ13258 359 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.02
MSH6-208ENST00000493177 SHHQ15465 462 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 CSPP1Q1MSJ5 1256 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 Q4G0T1 1027 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 MFSD5Q6N075 450 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 MBOAT7Q96N66 472 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 HIPK3Q9H422 1215 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 MLXIPQ9HAP2 919 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 JADE2Q9NQC1 790 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 PKD2L1Q9P0L9 805 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 DDX41Q9UJV9 622 aaKnown RBP15.15■□□□□ 0.02
MSH6-208ENST00000493177 TBX21Q9UL17 535 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
MSH6-208ENST00000493177 A6NJR5 290 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 SPTLC2O15270 562 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 OR52Z1P0C646 297 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 ITGB5P18084 799 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 MARCKSP29966 332 aaPredicted RBP15.14■□□□□ 0.01
MSH6-208ENST00000493177 ARHGAP1Q07960 439 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 MTMR1Q13613 665 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 LAMC2Q13753 1193 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 SLC39A14Q15043 492 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 DGKDQ16760 1214 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 NIPA1Q7RTP0 329 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 SLC43A3Q8NBI5 491 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 LINC00301Q8NCQ3 95 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 KCNG4Q8TDN1 519 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 LEO1Q8WVC0 666 aaPredicted RBP15.14■□□□□ 0.01
MSH6-208ENST00000493177 TRPV6Q9H1D0 765 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 TMEM60Q9H2L4 133 aa15.14■□□□□ 0.01
MSH6-208ENST00000493177 IGLV3-22A0A075B6J6 115 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 MEIS1O00470 390 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 GGPS1O95749 300 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 CD4P01730 458 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 ARP10275 920 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 CYP2C18P33260 490 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 TXKP42681 527 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 ME1P48163 572 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 ATP2C1P98194 919 aaPredicted RBP15.13■□□□□ 0.01
MSH6-208ENST00000493177 PTPAQ15257 358 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 NBPF20Q3BBV1 942 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 GPRASP2Q96D09 838 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 CDHR1Q96JP9 859 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 SPATA33Q96N06 139 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 RCOR1Q9UKL0 485 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 GRIN2DO15399 1336 aa15.13■□□□□ 0.01
MSH6-208ENST00000493177 GOLGA6L22H0YM25 854 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 LAD1O00515 517 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
MSH6-208ENST00000493177 MSH4O15457 936 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 CSF2RAP15509 400 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 CCL23P55773 120 aa15.12■□□□□ 0.01
MSH6-208ENST00000493177 TMEM266Q2M3C6 531 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms