RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MBTPS1Q14703 1052 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 FAM26DQ5JW98 314 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 FAM43BQ6ZT52 329 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-205ENST00000492851 MICALL1Q8N3F8 863 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 SAMD11Q96NU1 681 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 TGS1Q96RS0 853 aaKnown RBP14.25□□□□□ -0.13
COL6A1-205ENST00000492851 MXRA8Q9BRK3 442 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 SDF4Q9BRK5 362 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 AZI2Q9H6S1 392 aa14.25□□□□□ -0.13
COL6A1-205ENST00000492851 V9GY48 417 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-205ENST00000492851 KLF18A0A0U1RQI7 1052 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 GSTTP1A0A1W2PQM5 241 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 SMCO2A6NFE2 343 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 GOLGA8AA7E2F4 631 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 GOLGA8BA8MQT2 603 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 TNFRSF10AO00220 468 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 ADCY7P51828 1080 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 PPFIA1Q13136 1202 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 UBE2SQ16763 222 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 RAB11FIP4Q86YS3 637 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 CCDC12Q8WUD4 166 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-205ENST00000492851 LMBR1Q8WVP7 490 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 JPH1Q9HDC5 661 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-205ENST00000492851 PRDM6Q9NQX0 595 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 KCNH7Q9NS40 1196 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
COL6A1-205ENST00000492851 NFASCO94856 1347 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 CNTNAP5Q8WYK1 1306 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 RFXAPO00287 272 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 ZNF76P36508 570 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 SLC26A2P50443 739 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 GRB10Q13322 594 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 CEP55Q53EZ4 464 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 WWC2Q6AWC2 1192 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL6A1-205ENST00000492851 PLPPR4Q7Z2D5 763 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 TRIM50Q86XT4 487 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 MYOCDQ8IZQ8 938 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 FBXL16Q8N461 479 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 SLC9A2Q9UBY0 812 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 BRPF3Q9ULD4 1205 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 SCN5AQ14524 2016 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 CUL9Q8IWT3 2517 aa14.23□□□□□ -0.13
COL6A1-205ENST00000492851 EYSQ5T1H1 3165 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 MYH7BA7E2Y1 1941 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 LCHNA4D1U4 455 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 LINC01553A4QN01 128 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 REC8O95072 547 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 CTSHP09668 335 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 PSMA5P28066 241 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 METAP2P50579 478 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 HTRA4P83105 476 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 FUT2Q10981 343 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 COL9A3Q14050 684 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 GRIK4Q16099 956 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 ADCK5Q3MIX3 580 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 IER5Q5VY09 327 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 NIPA1Q7RTP0 329 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 ADAMTS19Q8TE59 1207 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 KCNB2Q92953 911 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 HLA-CQ95604 372 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 IFIH1Q9BYX4 1025 aaKnown RBP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 SUGCTQ9HAC7 445 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 TUBE1Q9UJT0 475 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 SQORQ9Y6N5 450 aa14.22□□□□□ -0.13
COL6A1-205ENST00000492851 BAZ2BQ9UIF8 2168 aaKnown RBP14.22□□□□□ -0.13
COL6A1-205ENST00000492851 MBLAC1A4D2B0 266 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 EPOPA6NHQ4 379 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 STXBP3O00186 592 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 MEIS1O00470 390 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 GNA11P29992 359 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 HSPA4P34932 840 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 SREBF1P36956 1147 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 PTPROQ16827 1216 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 PFKFB3Q16875 520 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 TCTN1Q2MV58 587 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 FAM117BQ6P1L5 589 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 BLOC1S2Q6QNY1 142 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 TMCO2Q7Z6W1 182 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 NME8Q8N427 588 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 UHRF1Q96T88 793 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-205ENST00000492851 YME1L1Q96TA2 773 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 ANO3Q9BYT9 981 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 C6orf50Q9HD87 102 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 PKD2L1Q9P0L9 805 aa14.21□□□□□ -0.13
COL6A1-205ENST00000492851 GBF1Q92538 1859 aa14.21□□□□□ -0.14
COL6A1-205ENST00000492851 ESYT2A0FGR8 921 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 M0QZ92 97 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 LPXNO60711 386 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 ARHGEF15O94989 841 aa14.2□□□□□ -0.14
COL6A1-205ENST00000492851 BMP1P13497 986 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms