RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 CD207Q9UJ71 328 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 LINC00271P0C7V0 271 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 GHRP10912 638 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 SDSP20132 328 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 GTF2F1P35269 517 aaKnown RBP eCLIP15.88■□□□□ 0.13
GPNMB-213ENST00000492512 BTG3Q14201 252 aaPredicted RBP15.88■□□□□ 0.13
GPNMB-213ENST00000492512 IMMTQ16891 758 aaKnown RBP15.88■□□□□ 0.13
GPNMB-213ENST00000492512 UTP14CQ5TAP6 766 aaKnown RBP15.88■□□□□ 0.13
GPNMB-213ENST00000492512 TRIM50Q86XT4 487 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 LMBR1Q8WVP7 490 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 PPP2R3CQ969Q6 453 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 GPR20Q99678 358 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 KRT23Q9C075 422 aa15.88■□□□□ 0.13
GPNMB-213ENST00000492512 USP34Q70CQ2 3546 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 LINC01565O15544 149 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 STAM2O75886 525 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 CHRNA1P02708 482 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 MMP1P03956 469 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 ICAM3P32942 547 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 NDUFV1P49821 464 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 ADAM17P78536 824 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 SNX27Q96L92 541 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 PHOX2BQ99453 314 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 PLVAPQ9BX97 442 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 CNNM2Q9H8M5 875 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 ALG13Q9NP73 1137 aaKnown RBP15.87■□□□□ 0.13
GPNMB-213ENST00000492512 MAD2L2Q9UI95 211 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 NRCAMQ92823 1304 aa15.87■□□□□ 0.13
GPNMB-213ENST00000492512 SPATA31C2B4DYI2 1134 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 ENPP3O14638 875 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 FIBPO43427 364 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 PTPN5P54829 565 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
GPNMB-213ENST00000492512 SP4Q02446 784 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 ADAM15Q13444 863 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 CWC27Q6UX04 472 aaKnown RBP15.86■□□□□ 0.13
GPNMB-213ENST00000492512 BMP8AQ7Z5Y6 402 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 RSPH3Q86UC2 560 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 PRSS33Q8NF86 280 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 PBXIP1Q96AQ6 731 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 INPP4AQ96PE3 977 aaPredicted RBP15.86■□□□□ 0.13
GPNMB-213ENST00000492512 PIGSQ96S52 555 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 EHMT1Q9H9B1 1298 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 RC3H2Q9HBD1 1191 aaKnown RBP15.86■□□□□ 0.13
GPNMB-213ENST00000492512 DIAPH3Q9NSV4 1193 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 RTEL1Q9NZ71 1219 aa15.86■□□□□ 0.13
GPNMB-213ENST00000492512 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
GPNMB-213ENST00000492512 CACNA1HO95180 2353 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 KIAA1671Q9BY89 1806 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
GPNMB-213ENST00000492512 TMEM221A6NGB7 291 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 M0R296 226 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 LPIN1Q14693 890 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 PKN1Q16512 942 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 TAF2Q6P1X5 1199 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 TRIM67Q6ZTA4 783 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 SUGP1Q8IWZ8 645 aaKnown RBP15.85■□□□□ 0.13
GPNMB-213ENST00000492512 ZNF689Q96CS4 500 aaPredicted RBP15.85■□□□□ 0.13
GPNMB-213ENST00000492512 MSLNLQ96KJ4 702 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 PRRX2Q99811 253 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 DSCC1Q9BVC3 393 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 LNPKQ9C0E8 428 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 PLAGL2Q9UPG8 496 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 CFAP54Q96N23 3096 aa15.85■□□□□ 0.13
GPNMB-213ENST00000492512 DGKIO75912 1065 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 EYA4O95677 639 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 SEMA3FQ13275 785 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 CAMK1Q14012 370 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 SEC23AQ15436 765 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 IER5LQ5T953 404 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 RUFY4Q6ZNE9 571 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 P2RX5Q93086 422 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 RIOX1Q9H6W3 641 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 TELO2Q9Y4R8 837 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 FRMPD4Q14CM0 1322 aa15.84■□□□□ 0.13
GPNMB-213ENST00000492512 ZFHX2Q9C0A1 2572 aaPredicted RBP15.83■□□□□ 0.13
GPNMB-213ENST00000492512 PNMA6FA0A0J9YX94 578 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 ST18O60284 1047 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 MGAT3Q09327 533 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 PPFIA1Q13136 1202 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 NAALADL2Q58DX5 795 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 SENP7Q9BQF6 1050 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 MRPL42Q9Y6G3 142 aaKnown RBP15.83■□□□□ 0.12
GPNMB-213ENST00000492512 LOXHD1Q8IVV2 1947 aa15.83■□□□□ 0.12
GPNMB-213ENST00000492512 HIP1O00291 1037 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 ITGB1P05556 798 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 DNAJB1P25685 340 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 TCF7P36402 384 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-213ENST00000492512 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
GPNMB-213ENST00000492512 ZXDAP98168 799 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 HDAC1Q13547 482 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-213ENST00000492512 GRM4Q14833 912 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 SLC35G1Q2M3R5 365 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 FBXO47Q5MNV8 452 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 TSHZ1Q6ZSZ6 1077 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 ADGRD2Q7Z7M1 963 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 CMTR2Q8IYT2 770 aaKnown RBP15.82■□□□□ 0.12
GPNMB-213ENST00000492512 FBXL6Q8N531 539 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 EFHBQ8N7U6 833 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms