RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 PLA2G4DQ86XP0 818 aa18.15■□□□□ 0.5
PKP4-214ENST00000492496 BLIDQ8IZY5 108 aa18.15■□□□□ 0.5
PKP4-214ENST00000492496 RASGRP4Q8TDF6 673 aa18.15■□□□□ 0.5
PKP4-214ENST00000492496 WASF1Q92558 559 aa18.15■□□□□ 0.5
PKP4-214ENST00000492496 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
PKP4-214ENST00000492496 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
PKP4-214ENST00000492496 LARGE1O95461 756 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 CTDNEP1O95476 244 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 IQCF3P0C7M6 154 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 SMIM10L2AP0DMW4 78 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 SMIM10L2BP0DMW5 78 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 RBM25P49756 843 aaKnown RBP18.14■□□□□ 0.49
PKP4-214ENST00000492496 USP11P51784 963 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 ZNF365Q70YC5 407 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 AFAP1L1Q8TED9 768 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 SCLYQ96I15 445 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 EMSYQ7Z589 1322 aa18.14■□□□□ 0.49
PKP4-214ENST00000492496 WDR81Q562E7 1941 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 C17orf102A2RUQ5 167 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 M0R2N6 131 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 LGR5O75473 907 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 PARNO95453 639 aaKnown RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 FGBP02675 491 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 ACRP10323 421 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 GNAT1P11488 350 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 SMAD3P84022 425 aaKnown RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 ITGB3BPQ13352 177 aaPredicted RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 NPY5RQ15761 445 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 RASIP1Q5U651 963 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 TRIM50Q86XT4 487 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 NECAB1Q8N987 351 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 HERVK_113Q902F9 699 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 DHX38Q92620 1227 aaKnown RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 PHF20Q9BVI0 1012 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 MTIF3Q9H2K0 278 aaKnown RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 RNPEPQ9H4A4 650 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 SMARCAD1Q9H4L7 1026 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 ERAP1Q9NZ08 941 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 ORC3Q9UBD5 711 aaPredicted RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 LIMCH1Q9UPQ0 1083 aa18.13■□□□□ 0.49
PKP4-214ENST00000492496 MYH9P35579 1960 aaKnown RBP18.13■□□□□ 0.49
PKP4-214ENST00000492496 ACTR2P61160 394 aa18.12■□□□□ 0.49
PKP4-214ENST00000492496 ZNF200P98182 395 aaPredicted RBP18.12■□□□□ 0.49
PKP4-214ENST00000492496 HIC1Q14526 733 aa18.12■□□□□ 0.49
PKP4-214ENST00000492496 KIF2CQ99661 725 aa18.12■□□□□ 0.49
PKP4-214ENST00000492496 TBC1D22BQ9NU19 505 aa18.12■□□□□ 0.49
PKP4-214ENST00000492496 IPO5O00410 1097 aaKnown RBP18.11■□□□□ 0.49
PKP4-214ENST00000492496 ATG7O95352 703 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 CKBP12277 381 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 SELPP16109 830 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 TRIM71Q2Q1W2 868 aaKnown RBP18.11■□□□□ 0.49
PKP4-214ENST00000492496 PRR16Q569H4 304 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 LRRC8DQ7L1W4 858 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 SERINC5Q86VE9 423 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
PKP4-214ENST00000492496 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 TBCKQ8TEA7 893 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 GLG1Q92896 1179 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 ATP6V0A1Q93050 837 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 VWCEQ96DN2 955 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 ZNF577Q9BSK1 485 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 AZI2Q9H6S1 392 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 UPF2Q9HAU5 1272 aaKnown RBP18.11■□□□□ 0.49
PKP4-214ENST00000492496 NRCAMQ92823 1304 aa18.11■□□□□ 0.49
PKP4-214ENST00000492496 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 DHX15O43143 795 aaKnown RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 EDIL3O43854 480 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 FDPSP14324 419 aaKnown RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 ADAM17P78536 824 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 FAM109BQ6ICB4 259 aaPredicted RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 PLPPR4Q7Z2D5 763 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 TNPO1Q92973 898 aaKnown RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 LENG9Q96B70 501 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
PKP4-214ENST00000492496 SETD4Q9NVD3 440 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 KCNJ14Q9UNX9 436 aa18.1■□□□□ 0.49
PKP4-214ENST00000492496 CYP3A7-CYP3A51PA0A087WV96 503 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 TREHO43280 583 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 CAND2O75155 1236 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 CYP3A7P24462 503 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 SLC26A2P50443 739 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 NONOQ15233 471 aaKnown RBP eCLIP18.09■□□□□ 0.49
PKP4-214ENST00000492496 ZNF746Q6NUN9 644 aaPredicted RBP18.09■□□□□ 0.49
PKP4-214ENST00000492496 MOXD1Q6UVY6 613 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 OTOP2Q7RTS6 562 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 DEFB128Q7Z7B8 93 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 PCYT2Q99447 389 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 TCEAL9Q9UHQ7 104 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 GBF1Q92538 1859 aa18.09■□□□□ 0.49
PKP4-214ENST00000492496 DDX39AO00148 427 aaKnown RBP18.08■□□□□ 0.48
PKP4-214ENST00000492496 CCNE2O96020 404 aa18.08■□□□□ 0.48
PKP4-214ENST00000492496 ACTN1P12814 892 aa18.08■□□□□ 0.48
PKP4-214ENST00000492496 MARK3P27448 753 aa18.08■□□□□ 0.48
PKP4-214ENST00000492496 STAT5BP51692 787 aa18.08■□□□□ 0.48
PKP4-214ENST00000492496 KRT76Q01546 638 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms