RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 STK32CQ86UX6 486 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 CCDC103Q8IW40 242 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 DNAJC10Q8IXB1 793 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZSWIM2Q8NEG5 633 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 YIPF4Q9BSR8 244 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 GPRC5CQ9NQ84 441 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 GULP1Q9UBP9 304 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 TMEFF2Q9UIK5 374 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 MRPS23Q9Y3D9 190 aaKnown RBP4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 BACE2Q9Y5Z0 518 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 ASXL2Q76L83 1435 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 TRBV23OR9-2A0A075B6M9 112 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 TRBV23-1A0A0A0MS06 115 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 BLACEA4D250 179 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 C2orf71A6NGG8 1288 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 NTRK1P04629 796 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 HSD3B2P26439 372 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 HOXC12P31275 282 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 SEPHS1P49903 392 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 DPTQ07507 201 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 MAP4K2Q12851 820 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 TESK1Q15569 626 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 PRR31Q5SQ13 230 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 MBLAC2Q68D91 279 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 NSMFQ6X4W1 530 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 KBTBD2Q8IY47 623 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 CRACR2BQ8N4Y2 399 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 CLUHP3Q96NS8 147 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 DHRS4Q9BTZ2 278 aa4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB1P30-201ENST00000492455 NPHS1O60500 1241 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 CDC45O75419 566 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 FUCA1P04066 466 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 SNRPB2P08579 225 aaKnown RBP4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 PLS3P13797 630 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZNF28P17035 718 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 ECI1P42126 302 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 INHBCP55103 352 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZC3H12BQ5HYM0 836 aaKnown RBP4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 MIIPQ5JXC2 388 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 RNF207Q6ZRF8 634 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 C16orf86Q6ZW13 317 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 HOMER1Q86YM7 354 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 MIB1Q86YT6 1006 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 SCUBE1Q8IWY4 988 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 FAM26EQ8N5C1 309 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 AMER2Q8N7J2 671 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 APPBP2Q92624 585 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 CLIC6Q96NY7 704 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 MTA3Q9BTC8 594 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 TRIM8Q9BZR9 551 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 BARX1Q9HBU1 254 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 NCOA5Q9HCD5 579 aaKnown RBP4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 FBLN5Q9UBX5 448 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 FTSJ1Q9UET6 329 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 SIT1Q9Y3P8 196 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 CD2APQ9Y5K6 639 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 NPFFR2Q9Y5X5 522 aa4.3□□□□□ -1.72
HMGB1P30-201ENST00000492455 B4GALT4O60513 344 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 ASMTLO95671 621 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 PAMP19021 973 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 LMO1P25800 156 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 IL13P35225 146 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 SUMO1P63165 101 aaKnown RBP4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 NKX3-2P78367 333 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 INF2Q27J81 1249 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 TRIM61Q5EBN2 209 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 ACBD5Q5T8D3 534 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 PKN3Q6P5Z2 889 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 GSTCDQ8NEC7 633 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 SLC7A14Q8TBB6 771 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 Q8TCH9 128 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 KCTD13Q8WZ19 329 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 CCDC140Q96MF4 163 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 SYT3Q9BQG1 590 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 IKZF4Q9H2S9 585 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 CLEC1BQ9P126 229 aa4.29□□□□□ -1.72
HMGB1P30-201ENST00000492455 SBNO2Q9Y2G9 1366 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 A0A087X1B8 175 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 NPHP3-ACAD11A0A0J9YXS1 232 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 FAM83GA6ND36 823 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 KCNQ2O43526 872 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 MSCO60682 206 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 CPP00450 1065 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 LCP1P13796 627 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 KCNJ6P48051 423 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 ATXN1P54253 815 aaKnown RBP4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 C21orf62-AS1Q17RA5 79 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 DALRD3Q5D0E6 543 aaKnown RBP4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 KCNT2Q6UVM3 1135 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 CPNE8Q86YQ8 564 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 PPIL6Q8IXY8 311 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 KLHL36Q8N4N3 616 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 SEC14L1Q92503 715 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZG16BQ96DA0 208 aa4.28□□□□□ -1.72
HMGB1P30-201ENST00000492455 NAF1Q96HR8 494 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms