RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 EMID1Q96A84 441 aaPredicted RBP10.82□□□□□ -0.68
USP54-214ENST00000492357 MAML3Q96JK9 1138 aa10.82□□□□□ -0.68
USP54-214ENST00000492357 NACC1Q96RE7 527 aa10.82□□□□□ -0.68
USP54-214ENST00000492357 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
USP54-214ENST00000492357 JPH1Q9HDC5 661 aaPredicted RBP10.82□□□□□ -0.68
USP54-214ENST00000492357 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
USP54-214ENST00000492357 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
USP54-214ENST00000492357 PCDHA10Q9Y5I2 948 aa10.82□□□□□ -0.68
USP54-214ENST00000492357 ATG7O95352 703 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 IGHA2P01877 340 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 PSAPP07602 524 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 PLCG1P19174 1290 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 HOXD10P28358 340 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 SLC26A2P50443 739 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
USP54-214ENST00000492357 LACTBP83111 547 aaPredicted RBP10.81□□□□□ -0.68
USP54-214ENST00000492357 SP3Q02447 781 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 GRB10Q13322 594 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 ITGB3BPQ13352 177 aaPredicted RBP10.81□□□□□ -0.68
USP54-214ENST00000492357 KCNB1Q14721 858 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 KARSQ15046 597 aaKnown RBP10.81□□□□□ -0.68
USP54-214ENST00000492357 NAALADL2Q58DX5 795 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 IQSEC1Q6DN90 963 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 NCAPH2Q6IBW4 605 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 SASS6Q6UVJ0 657 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 METTL7BQ6UX53 244 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 SV2BQ7L1I2 683 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 MIER3Q7Z3K6 550 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 C4orf19Q8IY42 314 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 RAD54LQ92698 747 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 ATP6V0A1Q93050 837 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 EIF2AK1Q9BQI3 630 aaKnown RBP10.81□□□□□ -0.68
USP54-214ENST00000492357 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 ZSWIM4Q9H7M6 989 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 SLC9A2Q9UBY0 812 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 SERTAD1Q9UHV2 236 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 DACH1Q9UI36 760 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
USP54-214ENST00000492357 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 Q9Y3F1 56 aa10.81□□□□□ -0.68
USP54-214ENST00000492357 PVALEFA0A1B0GWK0 134 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 COBLO75128 1261 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 EYA4O95677 639 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 PGK2P07205 417 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 SPATA31C1P0DKV0 1188 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 SCP2P22307 547 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 QARSP47897 775 aaKnown RBP10.8□□□□□ -0.68
USP54-214ENST00000492357 SARSP49591 514 aaKnown RBP10.8□□□□□ -0.68
USP54-214ENST00000492357 VEGFBP49765 207 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 PSMC5P62195 406 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 MAP2K1Q02750 393 aaPredicted RBP10.8□□□□□ -0.68
USP54-214ENST00000492357 LAMC2Q13753 1193 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 STX1AQ16623 288 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 MIS18BP1Q6P0N0 1132 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 CCDC62Q6P9F0 684 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 CATSPER3Q86XQ3 398 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 PDILTQ8N807 584 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 DHX58Q96C10 678 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 PNMA5Q96PV4 448 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 C7orf25Q9BPX7 421 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
USP54-214ENST00000492357 UNC45AQ9H3U1 944 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 ANKEF1Q9NU02 776 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 ANO10Q9NW15 660 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
USP54-214ENST00000492357 KCNG1Q9UIX4 513 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 DDX41Q9UJV9 622 aaKnown RBP10.8□□□□□ -0.68
USP54-214ENST00000492357 GJD2Q9UKL4 321 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 EMSYQ7Z589 1322 aa10.8□□□□□ -0.68
USP54-214ENST00000492357 A0A087X0B3 334 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 IGKV6D-21A0A0A0MT36 114 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 SYCE3A1L190 88 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 SLITRK3O94933 977 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 HSPA6P17066 643 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 UBA1P22314 1058 aaKnown RBP10.79□□□□□ -0.68
USP54-214ENST00000492357 DPYDQ12882 1025 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 PSMD2Q13200 908 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 COBLL1Q53SF7 1204 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 FOXR2Q6PJQ5 311 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 ABHD15Q6UXT9 468 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 OTUD6AQ7L8S5 288 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 EXOC8Q8IYI6 725 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 SYT2Q8N9I0 419 aaPredicted RBP10.79□□□□□ -0.68
USP54-214ENST00000492357 AFAP1L1Q8TED9 768 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 SMARCE1Q969G3 411 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 PAGE5Q96GU1 130 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 ERO1AQ96HE7 468 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 FAM167AQ96KS9 214 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 BPIFA3Q9BQP9 254 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 FUCA2Q9BTY2 467 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 KATNBL1Q9H079 304 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 BLOC1S4Q9NUP1 217 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 RNF186Q9NXI6 227 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 IGSF9BQ9UPX0 1349 aa10.79□□□□□ -0.68
USP54-214ENST00000492357 PP2D1A8MPX8 630 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 PEX10O60683 326 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 AOC2O75106 756 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 ATP9AO75110 1047 aa10.78□□□□□ -0.68
USP54-214ENST00000492357 MED24O75448 989 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms