RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 ZNF76P36508 570 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 ARHGAP4P98171 946 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 GPNMBQ14956 572 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 ZNF618Q5T7W0 954 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 NIPA1Q7RTP0 329 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 CCDC148Q8NFR7 591 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 BICD2Q8TD16 824 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 WNT8BQ93098 351 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 SDF4Q9BRK5 362 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 JPH1Q9HDC5 661 aaPredicted RBP30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 COL6A3P12111 3177 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 NFASCO94856 1347 aa30.93■■■□□ 2.54
SH3GL3-204ENST00000492099 EIF5BO60841 1220 aaKnown RBP30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 CXCL10P02778 98 aa30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 TRIM22Q8IYM9 498 aa30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 REXO1Q8N1G1 1221 aaKnown RBP30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 PHOSPHO2Q8TCD6 241 aa30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 SETD4Q9NVD3 440 aa30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 SLC9A2Q9UBY0 812 aa30.92■■■□□ 2.54
SH3GL3-204ENST00000492099 CPLX1O14810 134 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 TREHO43280 583 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 ARP10275 920 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 THPOP40225 353 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 SLC9A7Q96T83 725 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 SMARCAD1Q9H4L7 1026 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 ERAP1Q9NZ08 941 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 PCDHA11Q9Y5I1 949 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 NRCAMQ92823 1304 aa30.91■■■□□ 2.54
SH3GL3-204ENST00000492099 NBNO60934 754 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 CAND2O75155 1236 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 CYP3A4P08684 503 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 ANAPC15P60006 121 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 SSRP1Q08945 709 aaKnown RBP30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 GRIN2CQ14957 1233 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 CNKSR3Q6P9H4 555 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 TRAF7Q6Q0C0 670 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 MYLIPQ8WY64 445 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 GLG1Q92896 1179 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 SLC28A3Q9HAS3 691 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 AGO4Q9HCK5 861 aaKnown RBP30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 SH3GLB2Q9NR46 395 aa30.9■■■□□ 2.54
SH3GL3-204ENST00000492099 PPFIA3O75145 1194 aa30.89■■■□□ 2.54
SH3GL3-204ENST00000492099 CPLX2Q6PUV4 134 aaKnown RBP30.89■■■□□ 2.54
SH3GL3-204ENST00000492099 SLC17A8Q8NDX2 589 aa30.89■■■□□ 2.54
SH3GL3-204ENST00000492099 CRYGNQ8WXF5 182 aa30.89■■■□□ 2.54
SH3GL3-204ENST00000492099 EMSYQ7Z589 1322 aa30.89■■■□□ 2.54
SH3GL3-204ENST00000492099 RSPH10B2B2RC85 870 aa30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 RSPH10BP0C881 870 aa30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 RABGGTBP53611 331 aa30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 ADAM17P78536 824 aa30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 LARP6Q9BRS8 491 aaKnown RBP30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 NKX2-4Q9H2Z4 354 aa30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 YBX2Q9Y2T7 364 aaKnown RBP30.88■■■□□ 2.53
SH3GL3-204ENST00000492099 FOSL2P15408 326 aa30.87■■■□□ 2.53
SH3GL3-204ENST00000492099 KCNJ6P48051 423 aa30.87■■■□□ 2.53
SH3GL3-204ENST00000492099 PLA2G4DQ86XP0 818 aa30.87■■■□□ 2.53
SH3GL3-204ENST00000492099 LMBR1Q8WVP7 490 aa30.87■■■□□ 2.53
SH3GL3-204ENST00000492099 AZI2Q9H6S1 392 aa30.87■■■□□ 2.53
SH3GL3-204ENST00000492099 VPS54Q9P1Q0 977 aa30.87■■■□□ 2.53
SH3GL3-204ENST00000492099 FAM86B1E9PN63 330 aa30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 LGR5O75473 907 aa30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 FAM86B2P0C5J1 330 aa30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 ACTR2P61160 394 aa30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 ITGB3BPQ13352 177 aaPredicted RBP30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 TNPO1Q92973 898 aaKnown RBP30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 TET1Q8NFU7 2136 aa30.86■■■□□ 2.53
SH3GL3-204ENST00000492099 ABHD14A-ACY1A0A1B0GW23 586 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 ADAMTS3O15072 1205 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 EFCAB14O75071 495 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 DEXIO95424 95 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 MARK3P27448 753 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 PPFIA1Q13136 1202 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 STK3Q13188 491 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 MBTPS1Q14703 1052 aa30.85■■■□□ 2.53
SH3GL3-204ENST00000492099 KIF28PB7ZC32 967 aa30.84■■■□□ 2.53
SH3GL3-204ENST00000492099 NLRP5P59047 1200 aa30.84■■■□□ 2.53
SH3GL3-204ENST00000492099 SETQ01105 290 aaPredicted RBP30.84■■■□□ 2.53
SH3GL3-204ENST00000492099 IKBKEQ14164 716 aa30.84■■■□□ 2.53
SH3GL3-204ENST00000492099 PCYT2Q99447 389 aa30.84■■■□□ 2.53
SH3GL3-204ENST00000492099 IGLV3-22A0A075B6J6 115 aa30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 WDR5P61964 334 aaKnown RBP30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 ANKRD1Q15327 319 aa30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 TAF2Q6P1X5 1199 aa30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 PLPPR4Q7Z2D5 763 aa30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 HERC6Q8IVU3 1022 aa30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 FAM177A1Q8N128 213 aaPredicted RBP30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 MAFAQ8NHW3 353 aaPredicted RBP30.83■■■□□ 2.53
SH3GL3-204ENST00000492099 ATG7O95352 703 aa30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 MYOGP15173 224 aa30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 STAT5BP51692 787 aa30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 GRIK4Q16099 956 aa30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 PPP2R2DQ66LE6 453 aa30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 RASGRP4Q8TDF6 673 aa30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 GAS2L1Q99501 681 aaPredicted RBP30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 SLKQ9H2G2 1235 aaPredicted RBP30.82■■■□□ 2.52
SH3GL3-204ENST00000492099 CDH23Q9H251 3354 aa30.81■■■□□ 2.52
SH3GL3-204ENST00000492099 RRN3P2A6NIE6 340 aa30.81■■■□□ 2.52
SH3GL3-204ENST00000492099 IPO5O00410 1097 aaKnown RBP30.81■■■□□ 2.52
SH3GL3-204ENST00000492099 CDKL5O76039 1030 aa30.81■■■□□ 2.52
SH3GL3-204ENST00000492099 CIITAP33076 1130 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms