RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MYO7AQ13402 2215 aa23.87■■□□□ 1.41
CLIP2-208ENST00000491075 TRIOO75962 3097 aa23.86■■□□□ 1.41
CLIP2-208ENST00000491075 CYTH3O43739 400 aa23.86■■□□□ 1.41
CLIP2-208ENST00000491075 RB1P06400 928 aa23.86■■□□□ 1.41
CLIP2-208ENST00000491075 ARHGAP4P98171 946 aa23.86■■□□□ 1.41
CLIP2-208ENST00000491075 SEMA3FQ13275 785 aa23.86■■□□□ 1.41
CLIP2-208ENST00000491075 ADHFE1Q8IWW8 467 aa23.86■■□□□ 1.41
CLIP2-208ENST00000491075 ADGRA3Q8IWK6 1321 aa23.85■■□□□ 1.41
CLIP2-208ENST00000491075 NRCAMQ92823 1304 aa23.85■■□□□ 1.41
CLIP2-208ENST00000491075 C19orf67A6NJJ6 358 aa23.85■■□□□ 1.41
CLIP2-208ENST00000491075 RPAINQ86UA6 219 aa23.85■■□□□ 1.41
CLIP2-208ENST00000491075 ALYREFQ86V81 257 aaKnown RBP23.85■■□□□ 1.41
CLIP2-208ENST00000491075 KCNH6Q9H252 994 aa23.85■■□□□ 1.41
CLIP2-208ENST00000491075 ERICH2A1L162 156 aa23.84■■□□□ 1.41
CLIP2-208ENST00000491075 UTP14CQ5TAP6 766 aaKnown RBP23.84■■□□□ 1.41
CLIP2-208ENST00000491075 TAF2Q6P1X5 1199 aa23.84■■□□□ 1.41
CLIP2-208ENST00000491075 SENP7Q9BQF6 1050 aa23.84■■□□□ 1.41
CLIP2-208ENST00000491075 UPF3BQ9BZI7 483 aaKnown RBP23.84■■□□□ 1.41
CLIP2-208ENST00000491075 TTC3P53804 2025 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 IFIT3O14879 490 aaKnown RBP23.83■■□□□ 1.41
CLIP2-208ENST00000491075 BMPR1AP36894 532 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 LTBRP36941 435 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 CTC1Q2NKJ3 1217 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 XRRA1Q6P2D8 792 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 GIMAP8Q8ND71 665 aaPredicted RBP23.83■■□□□ 1.41
CLIP2-208ENST00000491075 POP1Q99575 1024 aaKnown RBP23.83■■□□□ 1.41
CLIP2-208ENST00000491075 IL25Q9H293 177 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 RTEL1Q9NZ71 1219 aa23.83■■□□□ 1.41
CLIP2-208ENST00000491075 CHRNA1P02708 482 aa23.82■■□□□ 1.4
CLIP2-208ENST00000491075 LINC00271P0C7V0 271 aa23.82■■□□□ 1.4
CLIP2-208ENST00000491075 GHRP10912 638 aa23.82■■□□□ 1.4
CLIP2-208ENST00000491075 TROAPQ12815 778 aa23.82■■□□□ 1.4
CLIP2-208ENST00000491075 SART3Q15020 963 aaKnown RBP23.82■■□□□ 1.4
CLIP2-208ENST00000491075 PCNX4Q63HM2 1172 aa23.82■■□□□ 1.4
CLIP2-208ENST00000491075 CLP1Q92989 425 aaKnown RBP23.82■■□□□ 1.4
CLIP2-208ENST00000491075 EHMT1Q9H9B1 1298 aa23.82■■□□□ 1.4
CLIP2-208ENST00000491075 RC3H2Q9HBD1 1191 aaKnown RBP23.82■■□□□ 1.4
CLIP2-208ENST00000491075 GRM6O15303 877 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 SP4Q02446 784 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 WTAPQ15007 396 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 SMAD2Q15796 467 aaKnown RBP23.81■■□□□ 1.4
CLIP2-208ENST00000491075 RSPH3Q86UC2 560 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 CUL5Q93034 780 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 U3KPZ7 1027 aaPredicted RBP23.81■■□□□ 1.4
CLIP2-208ENST00000491075 KIAA1671Q9BY89 1806 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 ZNF318Q5VUA4 2279 aa23.81■■□□□ 1.4
CLIP2-208ENST00000491075 IRS1P35568 1242 aa23.8■■□□□ 1.4
CLIP2-208ENST00000491075 HYAL1Q12794 435 aa23.8■■□□□ 1.4
CLIP2-208ENST00000491075 RALYLQ86SE5 291 aaKnown RBP23.8■■□□□ 1.4
CLIP2-208ENST00000491075 NLRX1Q86UT6 975 aa23.8■■□□□ 1.4
CLIP2-208ENST00000491075 SMARCC2Q8TAQ2 1214 aa23.8■■□□□ 1.4
CLIP2-208ENST00000491075 SENP2Q9HC62 589 aa23.8■■□□□ 1.4
CLIP2-208ENST00000491075 TELO2Q9Y4R8 837 aa23.8■■□□□ 1.4
CLIP2-208ENST00000491075 MMP1P03956 469 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 TCF7P36402 384 aaPredicted RBP23.79■■□□□ 1.4
CLIP2-208ENST00000491075 MRE11P49959 708 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 NHLH1Q02575 133 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 MGAT3Q09327 533 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 PPFIA1Q13136 1202 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 BTG3Q14201 252 aaPredicted RBP23.79■■□□□ 1.4
CLIP2-208ENST00000491075 LPIN1Q14693 890 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 RUFY4Q6ZNE9 571 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 CATIPQ7Z7H3 387 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 PLVAPQ9BX97 442 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 TUBE1Q9UJT0 475 aa23.79■■□□□ 1.4
CLIP2-208ENST00000491075 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
CLIP2-208ENST00000491075 PIK3CDO00329 1044 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 MBTPS2O43462 519 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 IGHDP01880 384 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 CYP21A2P08686 494 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 SMAD4Q13485 552 aaKnown RBP23.78■■□□□ 1.4
CLIP2-208ENST00000491075 PIBF1Q8WXW3 757 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 ZNF689Q96CS4 500 aaPredicted RBP23.78■■□□□ 1.4
CLIP2-208ENST00000491075 CDHR1Q96JP9 859 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 FBXL18Q96ME1 805 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 ERAP1Q9NZ08 941 aa23.78■■□□□ 1.4
CLIP2-208ENST00000491075 ENPP3O14638 875 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 TBX10O75333 385 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 RPLP2P05387 115 aaKnown RBP23.77■■□□□ 1.4
CLIP2-208ENST00000491075 DLX2Q07687 328 aaPredicted RBP23.77■■□□□ 1.4
CLIP2-208ENST00000491075 CLUL1Q15846 466 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 FBXO47Q5MNV8 452 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 USP17L6PQ6QN14 398 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 TSHZ1Q6ZSZ6 1077 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 NCOA7Q8NI08 942 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 GPRASP2Q96D09 838 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 RRP36Q96EU6 259 aaKnown RBP23.77■■□□□ 1.4
CLIP2-208ENST00000491075 SPZ1Q9BXG8 430 aa23.77■■□□□ 1.4
CLIP2-208ENST00000491075 MBLAC1A4D2B0 266 aaPredicted RBP23.76■■□□□ 1.39
CLIP2-208ENST00000491075 MEIS2O14770 477 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 GRIK4Q16099 956 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 HERC4Q5GLZ8 1057 aaPredicted RBP23.76■■□□□ 1.39
CLIP2-208ENST00000491075 HFE2Q6ZVN8 426 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 P2RX5Q93086 422 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 PPP2R3CQ969Q6 453 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 MAP3K14Q99558 947 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 CD207Q9UJ71 328 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 LOXHD1Q8IVV2 1947 aa23.76■■□□□ 1.39
CLIP2-208ENST00000491075 DGKIO75912 1065 aa23.75■■□□□ 1.39
CLIP2-208ENST00000491075 KCNA2P16389 499 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms