RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 PRDM10Q9NQV6 1147 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 SH3GLB2Q9NR46 395 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 CNNM1Q9NRU3 951 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
VPS41-214ENST00000490924 ZSWIM5Q9P217 1185 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 RWDD2AQ9UIY3 292 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 WWC3Q9ULE0 1092 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 RNF114Q9Y508 228 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
VPS41-214ENST00000490924 ABCB11O95342 1321 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 A0A0G2JLW4 131 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 TARSL2A2RTX5 802 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 A6NNZ2 444 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 BIN1O00499 593 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 LAD1O00515 517 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 IRS4O14654 1257 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 ORC4O43929 436 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 MMP20O60882 483 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 MFAP3LO75121 409 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 URI1O94763 535 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 IVLP07476 585 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 EEF1GP26641 437 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 CALML3P27482 149 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 CD68P34810 354 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 KRT2P35908 639 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 LONP1P36776 959 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 CD97P48960 835 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 GP2P55259 537 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 CHMP4BP1P59074 171 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 GNG11P61952 73 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 ATP2C1P98194 919 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 CDK17Q00537 523 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 AKAP17AQ02040 695 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 KCNB1Q14721 858 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 SEC23AQ15436 765 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 TUBB8Q3ZCM7 444 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 FIGNQ5HY92 759 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 OTUD7BQ6GQQ9 843 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 CYP26C1Q6V0L0 522 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 TOM1L2Q6ZVM7 507 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 PPFIBP1Q86W92 1011 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 CERS3Q8IU89 383 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 ZNF654Q8IZM8 581 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 DPF2Q92785 391 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 ERCC4Q92889 916 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 UBAC1Q9BSL1 405 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 SLC26A6Q9BXS9 759 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 QTRT2Q9H974 415 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 EPB41L4AQ9HCS5 686 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 PIH1D3Q9NQM4 214 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 GNL3LQ9NVN8 582 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 ZNHIT6Q9NWK9 470 aaKnown RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 ZHX1Q9UKY1 873 aaPredicted RBP6.56□□□□□ -1.36
VPS41-214ENST00000490924 MYH3P11055 1940 aa6.56□□□□□ -1.36
VPS41-214ENST00000490924 SYNRGQ9UMZ2 1314 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 BCORQ6W2J9 1755 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 ANO9A1A5B4 782 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 CTAGE9A4FU28 777 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 BTBD18B2RXH4 712 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 B4E1Z4 1266 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 H7C1D1 291 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 PSMD14O00487 310 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
VPS41-214ENST00000490924 IDH1O75874 414 aaKnown RBP6.55□□□□□ -1.36
VPS41-214ENST00000490924 APPP05067 770 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 CYP19A1P11511 503 aaPredicted RBP6.55□□□□□ -1.36
VPS41-214ENST00000490924 FMR1Q06787 632 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS41-214ENST00000490924 NAA30Q147X3 362 aaPredicted RBP6.55□□□□□ -1.36
VPS41-214ENST00000490924 SETDB1Q15047 1291 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 DUOXA2Q1HG44 320 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 CCDC152Q4G0S7 254 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 IQCEQ6IPM2 695 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 BRINP3Q76B58 766 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 HDXQ7Z353 690 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 CATIPQ7Z7H3 387 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 IQCA1Q86XH1 822 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 AGGF1Q8N302 714 aaeCLIP6.55□□□□□ -1.36
VPS41-214ENST00000490924 TTC16Q8NEE8 873 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 CTCFLQ8NI51 663 aaPredicted RBP6.55□□□□□ -1.36
VPS41-214ENST00000490924 GOLGA5Q8TBA6 731 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 ANKS1AQ92625 1134 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 FAM89AQ96GI7 184 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 CARD6Q9BX69 1037 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 FUT8Q9BYC5 575 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 HAUS4Q9H6D7 363 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 GREM2Q9H772 168 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 ABCA3Q99758 1704 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 TOGARAM1Q9Y4F4 1720 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
VPS41-214ENST00000490924 LAMB2P55268 1798 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 A0A1W2PQJ5 194 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 LINC01387J3KSC0 135 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 FANCGO15287 622 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 MBD4O95243 580 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 WNT11O96014 354 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 TAL1P17542 331 aaPredicted RBP6.54□□□□□ -1.36
VPS41-214ENST00000490924 WEE1P30291 646 aa6.54□□□□□ -1.36
VPS41-214ENST00000490924 PRPHP41219 470 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms