RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ZNF200	P98182	395 aa	Predicted RBP	21.09	■□□□□ 0.97
C4A-256	ENST00000490663	LETM2	Q2VYF4	491 aa		21.09	■□□□□ 0.97
C4A-256	ENST00000490663	NIPA1	Q7RTP0	329 aa		21.09	■□□□□ 0.97
C4A-256	ENST00000490663	FAM184A	Q8NB25	1140 aa		21.09	■□□□□ 0.97
C4A-256	ENST00000490663	GIMAP8	Q8ND71	665 aa	Predicted RBP	21.09	■□□□□ 0.97
C4A-256	ENST00000490663	TNFRSF25	Q93038	417 aa		21.09	■□□□□ 0.97
C4A-256	ENST00000490663	TOX2	Q96NM4	488 aa		21.09	■□□□□ 0.97
C4A-256	ENST00000490663	ZNF577	Q9BSK1	485 aa		21.09	■□□□□ 0.97
C4A-256	ENST00000490663	RANBP2	P49792	3224 aa	Known RBP	21.08	■□□□□ 0.97
C4A-256	ENST00000490663	NFASC	O94856	1347 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	IPO5	O00410	1097 aa	Known RBP	21.08	■□□□□ 0.97
C4A-256	ENST00000490663	WNT7A	O00755	349 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	KIAA0355	O15063	1070 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	MSH4	O15457	936 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	SLC37A4	O43826	429 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	RAG1	P15918	1043 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	CYP2C18	P33260	490 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	ACTR2	P61160	394 aa		21.08	■□□□□ 0.97
C4A-256	ENST00000490663	FAM177A1	Q8N128	213 aa	Predicted RBP	21.08	■□□□□ 0.97
C4A-256	ENST00000490663		H3BRB1	525 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	MAFG	O15525	162 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	DHX15	O43143	795 aa	Known RBP	21.07	■□□□□ 0.96
C4A-256	ENST00000490663	HMGN5	P82970	282 aa	Known RBP	21.07	■□□□□ 0.96
C4A-256	ENST00000490663	SET	Q01105	290 aa	Predicted RBP	21.07	■□□□□ 0.96
C4A-256	ENST00000490663	NFRKB	Q6P4R8	1299 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	C7orf31	Q8N865	590 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	PCYT2	Q99447	389 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	GDF15	Q99988	308 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	TUT1	Q9H6E5	874 aa	Known RBP	21.07	■□□□□ 0.96
C4A-256	ENST00000490663	BRMS1	Q9HCU9	246 aa		21.07	■□□□□ 0.96
C4A-256	ENST00000490663	USP11	P51784	963 aa		21.06	■□□□□ 0.96
C4A-256	ENST00000490663	NEK8	Q86SG6	692 aa		21.06	■□□□□ 0.96
C4A-256	ENST00000490663	SEPT1	Q8WYJ6	367 aa		21.06	■□□□□ 0.96
C4A-256	ENST00000490663	CTAGE1	Q96RT6	745 aa		21.06	■□□□□ 0.96
C4A-256	ENST00000490663	LBHD1	Q9BQE6	289 aa	Predicted RBP	21.06	■□□□□ 0.96
C4A-256	ENST00000490663	KATNAL1	Q9BW62	490 aa		21.06	■□□□□ 0.96
C4A-256	ENST00000490663	KIF28P	B7ZC32	967 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	CHMP2A	O43633	222 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	SMIM10L2A	P0DMW4	78 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	SMIM10L2B	P0DMW5	78 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	GJB2	P29033	226 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	CCL23	P55773	120 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	PTGIS	Q16647	500 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	WNT8B	Q93098	351 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	NOC4L	Q9BVI4	516 aa	Known RBP	21.05	■□□□□ 0.96
C4A-256	ENST00000490663	HIPK3	Q9H422	1215 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	RNPEP	Q9H4A4	650 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	DDX25	Q9UHL0	483 aa	Known RBP	21.05	■□□□□ 0.96
C4A-256	ENST00000490663	GTF2IRD1	Q9UHL9	959 aa		21.05	■□□□□ 0.96
C4A-256	ENST00000490663	CCNT1	O60563	726 aa	Known RBP	21.04	■□□□□ 0.96
C4A-256	ENST00000490663	ATP2B1	P20020	1258 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	MCM2	P49736	904 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	EPHB4	P54760	987 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	POTED	Q86YR6	584 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	GLG1	Q92896	1179 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	UBE2O	Q9C0C9	1292 aa	Known RBP	21.04	■□□□□ 0.96
C4A-256	ENST00000490663	WNT8A	Q9H1J5	351 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	PRO3102	Q9H379	93 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	FOXD4L1	Q9NU39	408 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	NOD1	Q9Y239	953 aa		21.04	■□□□□ 0.96
C4A-256	ENST00000490663	TIMP1	P01033	207 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663		Q4G0T1	1027 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	LRCH2	Q5VUJ6	765 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	CCDC60	Q8IWA6	550 aa	Predicted RBP	21.03	■□□□□ 0.96
C4A-256	ENST00000490663	FBXO18	Q8NFZ0	1043 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	DHX38	Q92620	1227 aa	Known RBP	21.03	■□□□□ 0.96
C4A-256	ENST00000490663	SLC5A5	Q92911	643 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	ZBTB10	Q96DT7	871 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	SCLY	Q96I15	445 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	MBOAT7	Q96N66	472 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	SETD4	Q9NVD3	440 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	ZNF215	Q9UL58	517 aa	Predicted RBP	21.03	■□□□□ 0.96
C4A-256	ENST00000490663	EMSY	Q7Z589	1322 aa		21.03	■□□□□ 0.96
C4A-256	ENST00000490663	CYP3A7-CYP3A51P	A0A087WV96	503 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	LGR5	O75473	907 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	SUPT20HL2	P0C7V6	817 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	CYP3A7	P24462	503 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	PTPN11	Q06124	597 aa	Predicted RBP	21.02	■□□□□ 0.96
C4A-256	ENST00000490663	TRMT1L	Q7Z2T5	733 aa	Known RBP	21.02	■□□□□ 0.96
C4A-256	ENST00000490663	SESTD1	Q86VW0	696 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	ETNPPL	Q8TBG4	499 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	UNC45A	Q9H3U1	944 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	SMC3	Q9UQE7	1217 aa		21.02	■□□□□ 0.96
C4A-256	ENST00000490663	C17orf102	A2RUQ5	167 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	BACH1	O14867	736 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	TREH	O43280	583 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	GAS7	O60861	476 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	ACR	P10323	421 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	CSF2RA	P15509	400 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	IGBP1	P78318	339 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	SAFB	Q15424	915 aa	Known RBP eCLIP	21.01	■□□□□ 0.95
C4A-256	ENST00000490663	C9orf50	Q5SZB4	431 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	ABHD15	Q6UXT9	468 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	TRAPPC12	Q8WVT3	735 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	TEKT3	Q9BXF9	490 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	TBC1D22B	Q9NU19	505 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	TCEAL9	Q9UHQ7	104 aa		21.01	■□□□□ 0.95
C4A-256	ENST00000490663	LAMA2	P24043	3122 aa	Known RBP	21.01	■□□□□ 0.95
C4A-256	ENST00000490663	ATG7	O95352	703 aa		21	■□□□□ 0.95
C4A-256	ENST00000490663	FPGS	Q05932	587 aa		21	■□□□□ 0.95

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms