RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CCDC103Q8IW40 242 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 ZC3H7AQ8IWR0 971 aaKnown RBP6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 IFNL3Q8IZI9 196 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 CEP89Q96ST8 783 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 IRF2BPLQ9H1B7 796 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 PLAGL2Q9UPG8 496 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 PCDHA11Q9Y5I1 949 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 MEGF6O75095 1541 aa6.55□□□□□ -1.36
SSX2IP-208ENST00000490476 PKD1L2Q7Z442 2459 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 ARHGEF5Q12774 1597 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 CYP26A1O43174 497 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 CPEP16870 476 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 PAMP19021 973 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 FSTP19883 344 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 RPL10P27635 214 aaKnown RBP6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 GPR85P60893 370 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 LAPTM5Q13571 262 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 IDI1Q13907 227 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 DOC2BQ14184 412 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 SEPT7Q16181 437 aaKnown RBP6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 RTP2Q5QGT7 225 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 XP32Q5T750 250 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 ACBD5Q5T8D3 534 aaPredicted RBP6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 RCSD1Q6JBY9 416 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 ZPBP2Q6X784 338 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 AFAP1L2Q8N4X5 818 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 LINC00116Q8NCU8 138 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 WNK4Q96J92 1243 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 CHAMP1Q96JM3 812 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 ATP13A1Q9HD20 1204 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 SAMD15Q9P1V8 674 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 AKAP12Q02952 1782 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 NRXN3Q9Y4C0 1643 aa6.54□□□□□ -1.36
SSX2IP-208ENST00000490476 MBD5Q9P267 1494 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 B4E1Z4 1266 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 CLCN7P51798 805 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 GUCY2FP51841 1108 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 EGR3Q06889 387 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 KCNAB2Q13303 367 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 INF2Q27J81 1249 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 SKOR2Q2VWA4 1001 aaPredicted RBP6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 BRDTQ58F21 947 aaPredicted RBP6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 E4F1Q66K89 784 aaPredicted RBP6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 ZCCHC8Q6NZY4 707 aaKnown RBP6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 WAPLQ7Z5K2 1190 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 DDX53Q86TM3 631 aaKnown RBP6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 SNX27Q96L92 541 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 PTCHD1Q96NR3 888 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 ALG1Q9BT22 464 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 GPR27Q9NS67 375 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 BTG4Q9NY30 223 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 COQ6Q9Y2Z9 468 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 PCDHA2Q9Y5H9 948 aa6.53□□□□□ -1.36
SSX2IP-208ENST00000490476 KIF1AQ12756 1690 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 NAT1P18440 290 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 ODR4Q5SWX8 454 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 ABHD17CQ6PCB6 329 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 RSPO2Q6UXX9 243 aaPredicted RBP6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 LBX2Q6XYB7 198 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 RNF111Q6ZNA4 994 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 RCBTB1Q8NDN9 531 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 NETO1Q8TDF5 533 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 JDP2Q8WYK2 163 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 USP7Q93009 1102 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 ZFYVE21Q9BQ24 234 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 MKNK2Q9HBH9 465 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 SEMA3GQ9NS98 782 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 TYW1Q9NV66 732 aaKnown RBP6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 NPFFR2Q9Y5X5 522 aa6.52□□□□□ -1.37
SSX2IP-208ENST00000490476 SPATA31A3Q5VYP0 1347 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 KCPQ6ZWJ8 1503 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 M0R2C6 588 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 GSC2O15499 205 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 FGF10O15520 208 aaPredicted RBP6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 GLRX3O76003 335 aaKnown RBP6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 PARNO95453 639 aaKnown RBP6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 POU3F2P20265 443 aaPredicted RBP6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 DNM2P50570 870 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 SCNN1BP51168 640 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 SOX10P56693 466 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 PAK1Q13153 545 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 SART3Q15020 963 aaKnown RBP6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 MBLAC2Q68D91 279 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 IQCEQ6IPM2 695 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 THAP5Q7Z6K1 395 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 NXPE1Q8N323 547 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 OR2W6PQ8NHA6 318 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 PI4K2BQ8TCG2 481 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 MCOLN1Q9GZU1 580 aa6.51□□□□□ -1.37
SSX2IP-208ENST00000490476 OVOS2A0A0G2JMS6 1433 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms