RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PBX2P40425 430 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 NTRK3Q16288 839 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 PKN1Q16512 942 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 EMSYQ7Z589 1322 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 SLC9A7Q96T83 725 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 RNPEPQ9H4A4 650 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 SMARCAD1Q9H4L7 1026 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 AZI2Q9H6S1 392 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 SLC28A3Q9HAS3 691 aa19.89■□□□□ 0.77
SEC13-218ENST00000490283 NFASCO94856 1347 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 NRCAMQ92823 1304 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 PPFIA3O75145 1194 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 CAND2O75155 1236 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 FOSL2P15408 326 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 ANAPC15P60006 121 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 CNKSR3Q6P9H4 555 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 NIPA1Q7RTP0 329 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 PHOSPHO2Q8TCD6 241 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 TNPO1Q92973 898 aaKnown RBP19.88■□□□□ 0.77
SEC13-218ENST00000490283 VWCEQ96DN2 955 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 SETD4Q9NVD3 440 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 TCEAL9Q9UHQ7 104 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 TANC1Q9C0D5 1861 aa19.88■□□□□ 0.77
SEC13-218ENST00000490283 RSPH10B2B2RC85 870 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 MEIS1O00470 390 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 TREHO43280 583 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 EFCAB14O75071 495 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 CDKL5O76039 1030 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 RSPH10BP0C881 870 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 HOXC8P31273 242 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 NLRP5P59047 1200 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 STK3Q13188 491 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 TRIM71Q2Q1W2 868 aaKnown RBP19.87■□□□□ 0.77
SEC13-218ENST00000490283 ZNF618Q5T7W0 954 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 PLA2G4DQ86XP0 818 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 SLC17A8Q8NDX2 589 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 CYP2W1Q8TAV3 490 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 MYLIPQ8WY64 445 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 NKX2-4Q9H2Z4 354 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 AGO4Q9HCK5 861 aaKnown RBP19.87■□□□□ 0.77
SEC13-218ENST00000490283 SH3GLB2Q9NR46 395 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 PCDHA11Q9Y5I1 949 aa19.87■□□□□ 0.77
SEC13-218ENST00000490283 GSTTP1A0A1W2PQM5 241 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 KIF28PB7ZC32 967 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 DEXIO95424 95 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 CXCL10P02778 98 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 ARP10275 920 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 MARK3P27448 753 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
SEC13-218ENST00000490283 PPFIA1Q13136 1202 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 HIC1Q14526 733 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 ANKRD1Q15327 319 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 WNT8BQ93098 351 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 GAS2L1Q99501 681 aaPredicted RBP19.86■□□□□ 0.77
SEC13-218ENST00000490283 VPS54Q9P1Q0 977 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 TELO2Q9Y4R8 837 aa19.86■□□□□ 0.77
SEC13-218ENST00000490283 NBNO60934 754 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 CYP3A4P08684 503 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 RABGGTBP53611 331 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 IKBKEQ14164 716 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 GRIN2CQ14957 1233 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 PPP2R2DQ66LE6 453 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 RSPH3Q86UC2 560 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 LMBR1Q8WVP7 490 aa19.85■□□□□ 0.77
SEC13-218ENST00000490283 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
SEC13-218ENST00000490283 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
SEC13-218ENST00000490283 ABHD14A-ACY1A0A1B0GW23 586 aa19.84■□□□□ 0.77
SEC13-218ENST00000490283 LGR5O75473 907 aa19.84■□□□□ 0.77
SEC13-218ENST00000490283 ACTR2P61160 394 aa19.84■□□□□ 0.77
SEC13-218ENST00000490283 TAF2Q6P1X5 1199 aa19.84■□□□□ 0.77
SEC13-218ENST00000490283 MAFAQ8NHW3 353 aaPredicted RBP19.84■□□□□ 0.77
SEC13-218ENST00000490283 C22orf23Q9BZE7 217 aa19.84■□□□□ 0.77
SEC13-218ENST00000490283 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
SEC13-218ENST00000490283 RRN3P2A6NIE6 340 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 FAM86B1E9PN63 330 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 CTSHP09668 335 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 FAM86B2P0C5J1 330 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 ITGB3BPQ13352 177 aaPredicted RBP19.83■□□□□ 0.77
SEC13-218ENST00000490283 GRIK4Q16099 956 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 FAM160B1Q5W0V3 765 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 HERC6Q8IVU3 1022 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 FAM177A1Q8N128 213 aaPredicted RBP19.83■□□□□ 0.77
SEC13-218ENST00000490283 RASGRP4Q8TDF6 673 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 ZNF577Q9BSK1 485 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 ZBED2Q9BTP6 218 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 TBC1D22BQ9NU19 505 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 TUBE1Q9UJT0 475 aa19.83■□□□□ 0.77
SEC13-218ENST00000490283 YBX2Q9Y2T7 364 aaKnown RBP19.83■□□□□ 0.77
SEC13-218ENST00000490283 SCN5AQ14524 2016 aa19.83■□□□□ 0.76
SEC13-218ENST00000490283 DDX39AO00148 427 aaKnown RBP19.82■□□□□ 0.76
SEC13-218ENST00000490283 IPO5O00410 1097 aaKnown RBP19.82■□□□□ 0.76
SEC13-218ENST00000490283 BACH1O14867 736 aa19.82■□□□□ 0.76
SEC13-218ENST00000490283 RPLP2P05387 115 aaKnown RBP19.82■□□□□ 0.76
SEC13-218ENST00000490283 XBP1P17861 261 aa19.82■□□□□ 0.76
SEC13-218ENST00000490283 SLC26A2P50443 739 aa19.82■□□□□ 0.76
SEC13-218ENST00000490283 STAT5BP51692 787 aa19.82■□□□□ 0.76
SEC13-218ENST00000490283 WDR5P61964 334 aaKnown RBP19.82■□□□□ 0.76
SEC13-218ENST00000490283 GPNMBQ14956 572 aa19.82■□□□□ 0.76
SEC13-218ENST00000490283 TRAF7Q6Q0C0 670 aa19.82■□□□□ 0.76
SEC13-218ENST00000490283 PLPPR4Q7Z2D5 763 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms