RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 HPXP02790 462 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ANXA1P04083 346 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 CYP7A1P22680 504 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ERVFC1P60507 584 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 SNW1Q13573 536 aaKnown RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 CWF19L2Q2TBE0 894 aaKnown RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ALDH1L2Q3SY69 923 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 TIGD5Q53EQ6 642 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ARSHQ5FYA8 562 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 NBPF12Q5TAG4 269 aaPredicted RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 FTSJ3Q8IY81 847 aaKnown RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 TMEM192Q8IY95 271 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 SSH1Q8WYL5 1049 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ARHGAP45Q92619 1136 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 CCDC74BQ96LY2 380 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ALPK1Q96QP1 1244 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 BDH2Q9BUT1 245 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 CHMP4BQ9H444 224 aaKnown RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 SLITRK6Q9H5Y7 841 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 PRDM11Q9NQV5 511 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ZSWIM5Q9P217 1185 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 KLHL3Q9UH77 587 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 PALD1Q9ULE6 856 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 ZNRF3Q9ULT6 936 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 R3HCC1Q9Y3T6 440 aaKnown RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 PCDHGB7Q9Y5F8 929 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 AK9Q5TCS8 1911 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 COL11A2P13942 1736 aaPredicted RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 DDX60Q8IY21 1712 aaKnown RBP4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 SLIT2O94813 1529 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 IGSF1Q8N6C5 1336 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 RTL1A6NKG5 1358 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 AATKQ6ZMQ8 1374 aa4.14□□□□□ -1.75
CRNKL1-203ENST00000490258 UBR3Q6ZT12 1888 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 MYO5AQ9Y4I1 1855 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 DISP2A7MBM2 1401 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 RGS12O14924 1447 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 NCAPD2Q15021 1401 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 TNS2Q63HR2 1409 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 MYH3P11055 1940 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 MRC1P22897 1456 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 ADAMTSL1Q8N6G6 1762 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 ELL2O00472 640 aaPredicted RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 IPO8O15397 1037 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 CDC45O75419 566 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 GCP02774 474 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 ZGLP1P0C6A0 271 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 NME1P15531 152 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 NCLP19338 710 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 TPP2P29144 1249 aaPredicted RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 ZNF76P36508 570 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 MTHFSDQ2M296 383 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 NBPF9Q3BBW0 867 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 SEZ6Q53EL9 994 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 LRSAM1Q6UWE0 723 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 TMEM57Q8N5G2 664 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 SHISA4Q96DD7 197 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 CFAP53Q96M91 514 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 PLEKHF1Q96S99 279 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 ADAM7Q9H2U9 754 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 BTG4Q9NY30 223 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 PCDHA11Q9Y5I1 949 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 DDX49Q9Y6V7 483 aaKnown RBP4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 ABCC4O15439 1325 aa4.13□□□□□ -1.75
CRNKL1-203ENST00000490258 OVOS2A0A0G2JMS6 1433 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 MYOCOSA0A1B0GUC4 107 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TMEM82A0PJX8 343 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 ZC3H12DA2A288 527 aaKnown RBP4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 MATN3O15232 486 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 PEX10O60683 326 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 LETM1O95202 739 aaPredicted RBP4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 RAD51AP2Q09MP3 1159 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 KIAA2012Q0VF49 1180 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 SLC39A6Q13433 755 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 BBS9Q3SYG4 887 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TAF3Q5VWG9 929 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 CAVIN1Q6NZI2 390 aaKnown RBP4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 NLRC3Q7RTR2 1065 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TMC3Q7Z5M5 1100 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 ARHGEF25Q86VW2 580 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 PPFIBP1Q86W92 1011 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 KIAA0825Q8IV33 1275 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 ITPRIPQ8IWB1 547 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TAB3Q8N5C8 712 aaPredicted RBP4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TSPYL6Q8N831 410 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 FAM184AQ8NB25 1140 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TMEM87AQ8NBN3 555 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 GPT2Q8TD30 523 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 LINC01599Q8WXQ3 324 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 PIBF1Q8WXW3 757 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 SLC9A7Q96T83 725 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 ADAMTS10Q9H324 1103 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 SMC4Q9NTJ3 1288 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 SLAMF8Q9P0V8 285 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 TMEM59LQ9UK28 342 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 ZDHHC9Q9Y397 364 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 MAP3K5Q99683 1374 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 CRB1P82279 1406 aa4.12□□□□□ -1.75
CRNKL1-203ENST00000490258 BCL9LQ86UU0 1499 aa4.11□□□□□ -1.75
CRNKL1-203ENST00000490258 ANKRD31Q8N7Z5 1873 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms