RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TAF11Q15544 211 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 KIAA1210Q9ULL0 1709 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 GRID2IPA4D2P6 1211 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 FOXP4Q8IVH2 680 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 MCPH1Q8NEM0 835 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 PPP1R2P1Q96PQ5 205 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 LRRC37BQ96QE4 947 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 BAG2O95816 211 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 RFX6Q8HWS3 928 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 INO80BQ9C086 356 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 SLC38A10Q9HBR0 1119 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 JAG2Q9Y219 1238 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 PFASO15067 1338 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 PPP1R12AO14974 1030 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 MAP3K7O43318 606 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 BUB1O43683 1085 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 BMP3P12645 472 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 TBXAS1P24557 533 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 IFRD2Q12894 506 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 PDXDC1Q6P996 788 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 LINC00301Q8NCQ3 95 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 DCAF4Q8WV16 495 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 PPCSQ9HAB8 311 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 KRT37O76014 449 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 XPAP23025 273 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 ITKQ08881 620 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 AP1ARQ63HQ0 302 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 DGKHQ86XP1 1220 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 KCTD6Q8NC69 237 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 USP21Q9UK80 565 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 IGSF1Q8N6C5 1336 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 WDR64B1ANS9 1081 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 ERCC3P19447 782 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 CA4P22748 312 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 CRLF3Q8IUI8 442 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 GRAMD1AQ96CP6 724 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 UNC13BO14795 1591 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-205ENST00000490035 CALB1P05937 261 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 SCP2P22307 547 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 CASP14P31944 242 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 ART3Q13508 389 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 SPDYE2Q495Y8 402 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 GPT2Q8TD30 523 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 LRRC4Q9HBW1 653 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 ANO9A1A5B4 782 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 NDUFA10O95299 355 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 ZYXQ15942 572 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 EFHBQ8N7U6 833 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 GFM2Q969S9 779 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PLEKHF1Q96S99 279 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 TIPINQ9BVW5 301 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 KLC2Q9H0B6 622 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 RASGRF2O14827 1237 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PRPSAP2O60256 369 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 SPARCL1Q14515 664 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 GCNAQ96QF7 691 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 ZMYND12Q9H0C1 365 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 MT-ND3P03897 115 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PTH1RQ03431 593 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 MESDQ14696 234 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 RC3H1Q5TC82 1133 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 SCYL3Q8IZE3 742 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 MAP2P11137 1827 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 MYBL1P10243 752 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 AP3M2P53677 418 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 KLHDC4Q8TBB5 520 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 TRIM45Q9H8W5 580 aaPredicted RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 NHEJ1Q9H9Q4 299 aaPredicted RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 GNGT2O14610 69 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 SMARCA1P28370 1054 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 LRMPQ12912 555 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PPP2R5CQ13362 524 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 DRP2Q13474 957 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 POLA2Q14181 598 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 NSUN7Q8NE18 718 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PPWD1Q96BP3 646 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 EPB41L5Q9HCM4 733 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 GOLGA8JA6NMD2 632 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 FAM173BQ6P4H8 233 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 WDR75Q8IWA0 830 aaKnown RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 SLC35F6Q8N357 371 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 CCDC138Q96M89 665 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PDE11AQ9HCR9 933 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 SH2B2O14492 632 aaPredicted RBP9.53□□□□□ -0.88
LSAMP-205ENST00000490035 MECOMQ03112 1051 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 BRIP1Q9BX63 1249 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 NUB1Q9Y5A7 615 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 CAMSAP1Q5T5Y3 1602 aa9.53□□□□□ -0.88
LSAMP-205ENST00000490035 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 MXI1P50539 228 aa9.52□□□□□ -0.88
LSAMP-205ENST00000490035 TAF1BQ53T94 588 aaPredicted RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 MAN1B1Q9UKM7 699 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms