RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 RASSF7Q02833 373 aa29.32■■■□□ 2.28
KCNC4-207ENST00000489935 PPP2R5CQ13362 524 aa29.32■■■□□ 2.28
KCNC4-207ENST00000489935 TBC1D10BQ4KMP7 808 aaPredicted RBP29.32■■■□□ 2.28
KCNC4-207ENST00000489935 PRPF38AQ8NAV1 312 aaKnown RBP29.32■■■□□ 2.28
KCNC4-207ENST00000489935 ARID3AQ99856 593 aa29.32■■■□□ 2.28
KCNC4-207ENST00000489935 EHMT1Q9H9B1 1298 aa29.32■■■□□ 2.28
KCNC4-207ENST00000489935 WDR46O15213 610 aaKnown RBP29.31■■■□□ 2.28
KCNC4-207ENST00000489935 ARP10275 920 aa29.31■■■□□ 2.28
KCNC4-207ENST00000489935 HSD17B4P51659 736 aa29.31■■■□□ 2.28
KCNC4-207ENST00000489935 CEP63Q96MT8 703 aa29.31■■■□□ 2.28
KCNC4-207ENST00000489935 RUSC1Q9BVN2 902 aa29.31■■■□□ 2.28
KCNC4-207ENST00000489935 KIAA1683Q9H0B3 1180 aa29.31■■■□□ 2.28
KCNC4-207ENST00000489935 CGNQ9P2M7 1197 aaKnown RBP29.31■■■□□ 2.28
KCNC4-207ENST00000489935 CNOT7Q9UIV1 285 aaKnown RBP29.31■■■□□ 2.28
KCNC4-207ENST00000489935 CHMP2AO43633 222 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 SFR1Q86XK3 245 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 DYDC2Q96IM9 177 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 BCAS3Q9H6U6 928 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 POLD4Q9HCU8 107 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 HACL1Q9UJ83 578 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 RABGAP1Q9Y3P9 1069 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 RSPH10B2B2RC85 870 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 RSPH10BP0C881 870 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 CCDC155Q8N6L0 562 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 PIGOQ8TEQ8 1089 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 CLEC4DQ8WXI8 215 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 HOOK2Q96ED9 719 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 TUFT1Q9NNX1 390 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 FAM207AQ9NSI2 230 aaPredicted RBP29.3■■■□□ 2.28
KCNC4-207ENST00000489935 COL20A1Q9P218 1284 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 GJA3Q9Y6H8 435 aa29.3■■■□□ 2.28
KCNC4-207ENST00000489935 CTNND1O60716 968 aaKnown RBP29.29■■■□□ 2.28
KCNC4-207ENST00000489935 KIF20AO95235 890 aa29.29■■■□□ 2.28
KCNC4-207ENST00000489935 HERVK_113P62684 666 aa29.29■■■□□ 2.28
KCNC4-207ENST00000489935 EPM2AIP1Q7L775 607 aaPredicted RBP29.29■■■□□ 2.28
KCNC4-207ENST00000489935 TPH2Q8IWU9 490 aa29.29■■■□□ 2.28
KCNC4-207ENST00000489935 LPAR1Q92633 364 aa29.29■■■□□ 2.28
KCNC4-207ENST00000489935 MMRN2Q9H8L6 949 aa29.29■■■□□ 2.28
KCNC4-207ENST00000489935 NHEJ1Q9H9Q4 299 aaPredicted RBP29.29■■■□□ 2.28
KCNC4-207ENST00000489935 ZNHIT6Q9NWK9 470 aaKnown RBP29.29■■■□□ 2.28
KCNC4-207ENST00000489935 NFIBO00712 420 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 GAS7O60861 476 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 HOXD13P35453 343 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 CCDC40Q4G0X9 1142 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 ZC3H3Q8IXZ2 948 aaKnown RBP29.28■■■□□ 2.28
KCNC4-207ENST00000489935 SLC35F6Q8N357 371 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 MNS1Q8NEH6 495 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 ZNF397Q8NF99 534 aaPredicted RBP29.28■■■□□ 2.28
KCNC4-207ENST00000489935 IQCDQ96DY2 449 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 ZNF577Q9BSK1 485 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 ZBTB39O15060 712 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 TADA3O75528 432 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 KCNMA1Q12791 1236 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 RINT1Q6NUQ1 792 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 KCTD17Q8N5Z5 321 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 TRIM10Q9UDY6 481 aa29.28■■■□□ 2.28
KCNC4-207ENST00000489935 FZD9O00144 591 aa29.27■■■□□ 2.28
KCNC4-207ENST00000489935 NBPF12Q5TAG4 269 aaPredicted RBP29.27■■■□□ 2.28
KCNC4-207ENST00000489935 CPXCR1Q8N123 301 aa29.27■■■□□ 2.28
KCNC4-207ENST00000489935 TANGO6Q9C0B7 1094 aa29.27■■■□□ 2.28
KCNC4-207ENST00000489935 UNC45AQ9H3U1 944 aa29.27■■■□□ 2.28
KCNC4-207ENST00000489935 MYBP10242 640 aa29.26■■■□□ 2.28
KCNC4-207ENST00000489935 MARSP56192 900 aaKnown RBP29.26■■■□□ 2.28
KCNC4-207ENST00000489935 CDK17Q00537 523 aa29.26■■■□□ 2.28
KCNC4-207ENST00000489935 ADAM9Q13443 819 aa29.26■■■□□ 2.28
KCNC4-207ENST00000489935 MXRA8Q9BRK3 442 aa29.26■■■□□ 2.28
KCNC4-207ENST00000489935 CCDC94Q9BW85 323 aaPredicted RBP29.26■■■□□ 2.28
KCNC4-207ENST00000489935 TFR2Q9UP52 801 aa29.26■■■□□ 2.28
KCNC4-207ENST00000489935 LTBP3Q9NS15 1303 aa29.26■■■□□ 2.27
KCNC4-207ENST00000489935 HNRNPH3P31942 346 aaKnown RBP29.26■■■□□ 2.27
KCNC4-207ENST00000489935 EDRF1Q3B7T1 1238 aa29.26■■■□□ 2.27
KCNC4-207ENST00000489935 SMCR8Q8TEV9 937 aaPredicted RBP29.26■■■□□ 2.27
KCNC4-207ENST00000489935 RAVER2Q9HCJ3 691 aaKnown RBP29.26■■■□□ 2.27
KCNC4-207ENST00000489935 RPTORQ8N122 1335 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 GNA14O95837 355 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 ITGB5P18084 799 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 SETQ01105 290 aaPredicted RBP29.25■■■□□ 2.27
KCNC4-207ENST00000489935 B3GNT9Q6UX72 402 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 TRIM59Q8IWR1 403 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 SLC38A10Q9HBR0 1119 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 GINM1Q9NU53 330 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 WRAP73Q9P2S5 460 aaPredicted RBP29.25■■■□□ 2.27
KCNC4-207ENST00000489935 PLAGL2Q9UPG8 496 aa29.25■■■□□ 2.27
KCNC4-207ENST00000489935 PRPF6O94906 941 aaKnown RBP29.24■■■□□ 2.27
KCNC4-207ENST00000489935 PPP2R3AQ06190 1150 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 KNOP1Q1ED39 458 aaKnown RBP29.24■■■□□ 2.27
KCNC4-207ENST00000489935 FBXO38Q6PIJ6 1188 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 PPP4R3CPQ6ZMV5 832 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 CCDC170Q8IYT3 715 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 SFI1A8K8P3 1242 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 EFCAB8A8MWE9 144 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 ALAS1P13196 640 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 MTMR2Q13614 643 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 MUM1L1Q5H9M0 696 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 C1orf186Q6ZWK4 172 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 IL31RAQ8NI17 732 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 SGIP1Q9BQI5 828 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 MYO1AQ9UBC5 1043 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 TRAF3IP3Q9Y228 551 aa29.24■■■□□ 2.27
KCNC4-207ENST00000489935 CD2APQ9Y5K6 639 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms