RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
TRIM40-208ENST00000489892 SERTAD1Q9UHV2 236 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 VAV3Q9UKW4 847 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 NFASCO94856 1347 aa13.06□□□□□ -0.32
TRIM40-208ENST00000489892 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRIM40-208ENST00000489892 PLCG1P19174 1290 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 EPHA7Q15375 998 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 Q3C1V9 767 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 TMEM119Q4V9L6 283 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 ZNF746Q6NUN9 644 aaPredicted RBP13.05□□□□□ -0.32
TRIM40-208ENST00000489892 PDXDC2PQ6P474 469 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 SV2BQ7L1I2 683 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 OTOP1Q7RTM1 612 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 CKAP2LQ8IYA6 745 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 SMAP1Q8IYB5 467 aaPredicted RBP13.05□□□□□ -0.32
TRIM40-208ENST00000489892 CYP2W1Q8TAV3 490 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 SOCS4Q8WXH5 440 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 SENP7Q9BQF6 1050 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 ADGRA2Q96PE1 1338 aa13.05□□□□□ -0.32
TRIM40-208ENST00000489892 ZNF236Q9UL36 1845 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 COL6A3P12111 3177 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 SPATA31C2B4DYI2 1134 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 ARP10275 920 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 CDC25BP30305 580 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 IRF5Q13568 498 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 GRB14Q14449 540 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 NEDD9Q14511 834 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
TRIM40-208ENST00000489892 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
TRIM40-208ENST00000489892 NT5DC1Q5TFE4 455 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 MIER3Q7Z3K6 550 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 GPR142Q7Z601 462 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 MTERF4Q7Z6M4 381 aaKnown RBP13.04□□□□□ -0.32
TRIM40-208ENST00000489892 MORC4Q8TE76 937 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 LARP4BQ92615 738 aaKnown RBP13.04□□□□□ -0.32
TRIM40-208ENST00000489892 PAGE5Q96GU1 130 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 PORCNQ9H237 461 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 KBTBD4Q9NVX7 518 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 TUBE1Q9UJT0 475 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 DNM3Q9UQ16 869 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIM40-208ENST00000489892 HTTP42858 3142 aa13.04□□□□□ -0.32
TRIM40-208ENST00000489892 A0A087X0B3 334 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 SOWAHBA6NEL2 793 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 PP2D1A8MPX8 630 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
TRIM40-208ENST00000489892 ADORA2AP29274 412 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 CDC25AP30304 524 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 PPP1R2P41236 205 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
TRIM40-208ENST00000489892 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 DPP9Q86TI2 863 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 RAD54LQ92698 747 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
TRIM40-208ENST00000489892 MMTAG2Q9BU76 263 aaKnown RBP13.03□□□□□ -0.32
TRIM40-208ENST00000489892 JPH1Q9HDC5 661 aaPredicted RBP13.03□□□□□ -0.32
TRIM40-208ENST00000489892 CENPFP49454 3210 aa13.02□□□□□ -0.32
TRIM40-208ENST00000489892 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.32
TRIM40-208ENST00000489892 P4HBP07237 508 aaKnown RBP13.02□□□□□ -0.33
TRIM40-208ENST00000489892 GRB10Q13322 594 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 PNOCQ13519 176 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 CNNM4Q6P4Q7 775 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 C17orf99Q6UX52 265 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 MLKLQ8NB16 471 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 SPATA20Q8TB22 786 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 SCFD2Q8WU76 684 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 ATP6V0A1Q93050 837 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
TRIM40-208ENST00000489892 R3HDMLQ9H3Y0 253 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 VTA1Q9NP79 307 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 KCND2Q9NZV8 630 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 KIAA1024Q9UPX6 916 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 KIAA0100Q14667 2235 aaKnown RBP13.02□□□□□ -0.33
TRIM40-208ENST00000489892 PLXNB2O15031 1838 aa13.02□□□□□ -0.33
TRIM40-208ENST00000489892 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
TRIM40-208ENST00000489892 CHMP2AO43633 222 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 LYPLA2O95372 231 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 PGK2P07205 417 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 PSAPP07602 524 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 AFMP43652 599 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 NLRP12P59046 1061 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 TPM4P67936 248 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 DPYDQ12882 1025 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
TRIM40-208ENST00000489892 KCNB1Q14721 858 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms