RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 SMARCAD1Q9H4L7 1026 aa20.33■□□□□ 0.85
ABCF3-217ENST00000489719 JPH1Q9HDC5 661 aaPredicted RBP20.33■□□□□ 0.85
ABCF3-217ENST00000489719 SETD4Q9NVD3 440 aa20.33■□□□□ 0.85
ABCF3-217ENST00000489719 SLC9A2Q9UBY0 812 aa20.33■□□□□ 0.85
ABCF3-217ENST00000489719 CYP3A4P08684 503 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 THPOP40225 353 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 RBL2Q08999 1139 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 HIC1Q14526 733 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 NIPA1Q7RTP0 329 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 SERINC5Q86VE9 423 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 GUCD1Q96NT3 240 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 CDX2Q99626 313 aaPredicted RBP20.32■□□□□ 0.84
ABCF3-217ENST00000489719 TTYH1Q9H313 450 aaPredicted RBP20.32■□□□□ 0.84
ABCF3-217ENST00000489719 AGO4Q9HCK5 861 aaKnown RBP20.32■□□□□ 0.84
ABCF3-217ENST00000489719 SH3GLB2Q9NR46 395 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 ERAP1Q9NZ08 941 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 VPS54Q9P1Q0 977 aa20.32■□□□□ 0.84
ABCF3-217ENST00000489719 NFASCO94856 1347 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 TREHO43280 583 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 ATP2A2P16615 1042 aaKnown RBP20.31■□□□□ 0.84
ABCF3-217ENST00000489719 PBX2P40425 430 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 ANKRD1Q15327 319 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 TRIM71Q2Q1W2 868 aaKnown RBP20.31■□□□□ 0.84
ABCF3-217ENST00000489719 ZNF618Q5T7W0 954 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 PLA2G4DQ86XP0 818 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 TNPO1Q92973 898 aaKnown RBP20.31■□□□□ 0.84
ABCF3-217ENST00000489719 SLKQ9H2G2 1235 aaPredicted RBP20.31■□□□□ 0.84
ABCF3-217ENST00000489719 ZNF576Q9H609 170 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 AZI2Q9H6S1 392 aa20.31■□□□□ 0.84
ABCF3-217ENST00000489719 NRCAMQ92823 1304 aa20.3■□□□□ 0.84
ABCF3-217ENST00000489719 RSPH10B2B2RC85 870 aa20.3■□□□□ 0.84
ABCF3-217ENST00000489719 CDKL5O76039 1030 aa20.3■□□□□ 0.84
ABCF3-217ENST00000489719 DEXIO95424 95 aa20.3■□□□□ 0.84
ABCF3-217ENST00000489719 RSPH10BP0C881 870 aa20.3■□□□□ 0.84
ABCF3-217ENST00000489719 BAIAP3O94812 1187 aa20.29■□□□□ 0.84
ABCF3-217ENST00000489719 MARK3P27448 753 aa20.29■□□□□ 0.84
ABCF3-217ENST00000489719 HOXC8P31273 242 aa20.29■□□□□ 0.84
ABCF3-217ENST00000489719 PHOSPHO2Q8TCD6 241 aa20.29■□□□□ 0.84
ABCF3-217ENST00000489719 WNT8BQ93098 351 aa20.29■□□□□ 0.84
ABCF3-217ENST00000489719 SLC28A3Q9HAS3 691 aa20.29■□□□□ 0.84
ABCF3-217ENST00000489719 FAM86B1E9PN63 330 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 ADAMTS3O15072 1205 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 NBNO60934 754 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 CXCL10P02778 98 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 FAM86B2P0C5J1 330 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 KCNJ6P48051 423 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 RABGGTBP53611 331 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 ACTR2P61160 394 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 PPFIA1Q13136 1202 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 ITGB3BPQ13352 177 aaPredicted RBP20.28■□□□□ 0.84
ABCF3-217ENST00000489719 GPNMBQ14956 572 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 CNKSR3Q6P9H4 555 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 RASGRP4Q8TDF6 673 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 SLC9A7Q96T83 725 aa20.28■□□□□ 0.84
ABCF3-217ENST00000489719 EMSYQ7Z589 1322 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 MYH7BA7E2Y1 1941 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 KIF28PB7ZC32 967 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 CAND2O75155 1236 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 LGR5O75473 907 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 STAT5BP51692 787 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 IKBKEQ14164 716 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 GRIN2CQ14957 1233 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 LMBR1Q8WVP7 490 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 CRYGNQ8WXF5 182 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 ZNF577Q9BSK1 485 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 TBC1D22BQ9NU19 505 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 TPCN1Q9ULQ1 816 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 PCDHA4Q9UN74 947 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 PCDHA11Q9Y5I1 949 aa20.27■□□□□ 0.84
ABCF3-217ENST00000489719 LAMA2P24043 3122 aaKnown RBP20.26■□□□□ 0.83
ABCF3-217ENST00000489719 ABHD14A-ACY1A0A1B0GW23 586 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 RRN3P2A6NIE6 340 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 DDX39AO00148 427 aaKnown RBP20.26■□□□□ 0.83
ABCF3-217ENST00000489719 IPO5O00410 1097 aaKnown RBP20.26■□□□□ 0.83
ABCF3-217ENST00000489719 PFKFB2O60825 505 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 USP11P51784 963 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 ADAM17P78536 824 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 SETQ01105 290 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-217ENST00000489719 SCRN1Q12765 414 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 GRIK4Q16099 956 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 PRR16Q569H4 304 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 GALNT17Q6IS24 598 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 TRAF7Q6Q0C0 670 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 PLPPR4Q7Z2D5 763 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 RSPH3Q86UC2 560 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
ABCF3-217ENST00000489719 SLC17A8Q8NDX2 589 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 MYLIPQ8WY64 445 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 TCEAL9Q9UHQ7 104 aa20.26■□□□□ 0.83
ABCF3-217ENST00000489719 IGLV3-22A0A075B6J6 115 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 BACH1O14867 736 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 EFCAB14O75071 495 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 ATG7O95352 703 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 XBP1P17861 261 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 CIITAP33076 1130 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 NEK4P51957 841 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 AK2P54819 239 aa20.25■□□□□ 0.83
ABCF3-217ENST00000489719 IGBP1P78318 339 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms