RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 C11orf74Q86VG3 221 aa4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 DDX42Q86XP3 938 aaKnown RBP eCLIP4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 SMC1BQ8NDV3 1235 aa4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 CHTF18Q8WVB6 975 aa4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 DDX11Q96FC9 970 aa4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 PUS7Q96PZ0 661 aaKnown RBP4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 EPB41L4BQ9H329 900 aa4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 IFT22Q9H7X7 185 aa4.89□□□□□ -1.63
AC055855.1-201ENST00000489563 LRRC10BA6NIK2 292 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 HRKO00198 91 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 NEMP1O14524 444 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 ZEB2O60315 1214 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 BRINP1O60477 761 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 FKBP9O95302 570 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 ZBTB48P10074 688 aaPredicted RBP4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 PTPN1P18031 435 aaKnown RBP4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 CDK11BP21127 795 aaKnown RBP4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 GJA4P35212 333 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 EPHA5P54756 1037 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 TMEM132BQ14DG7 1078 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 FKBP9P1Q75LS8 142 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 WDR66Q8TBY9 1149 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 PCIF1Q9H4Z3 704 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 OXSMQ9NWU1 459 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 TELO2Q9Y4R8 837 aa4.88□□□□□ -1.63
AC055855.1-201ENST00000489563 PRAMEF25A6NGN4 478 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 FAM90A27PA6NNH2 459 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 BUB1BO60566 1050 aaPredicted RBP4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 EYA4O95677 639 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 BPIP17213 487 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 SLC9A1P19634 815 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 POU3F3P20264 500 aaPredicted RBP4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 ADCYAP1R1P41586 468 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 ID4P47928 161 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 KIF11P52732 1056 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 STAT4Q14765 748 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 PAN2Q504Q3 1202 aaKnown RBP4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 ETV3LQ6ZN32 361 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 AMIGO3Q86WK7 504 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 PASD1Q8IV76 773 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 NOSTRINQ8IVI9 506 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 TOE1Q96GM8 510 aaKnown RBP4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 KCNK12Q9HB15 430 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 KCNH7Q9NS40 1196 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 SPTLC3Q9NUV7 552 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 DTLQ9NZJ0 730 aa4.87□□□□□ -1.63
AC055855.1-201ENST00000489563 PEX10O60683 326 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 ASGR2P07307 311 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 NCAM1P13591 858 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 FAHP16930 419 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 PMLP29590 882 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 STAT5AP42229 794 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 LSSP48449 732 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 CDKN1CP49918 316 aaPredicted RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 NCKAP1LP55160 1127 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 EVA1CP58658 441 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 NKX3-2P78367 333 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 TMPRSS15P98073 1019 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 TARBP2Q15633 366 aaKnown RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 ATP13A4Q4VNC1 1196 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 RNF219Q5W0B1 726 aaPredicted RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 FSTL4Q6MZW2 842 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 CD300LDQ6UXZ3 194 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 ZC3H18Q86VM9 953 aaKnown RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 LDHDQ86WU2 507 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 MIB1Q86YT6 1006 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 FAM126BQ8IXS8 530 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 EFHBQ8N7U6 833 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 PRPF38AQ8NAV1 312 aaKnown RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 TTLL11Q8NHH1 800 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 DLG3Q92796 817 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 SCYL1Q96KG9 808 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 MCOLN1Q9GZU1 580 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 NGRNQ9NPE2 291 aaKnown RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 ACSS2Q9NR19 701 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 H2AFY2Q9P0M6 372 aaPredicted RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 PLA2G2DQ9UNK4 145 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 FAN1Q9Y2M0 1017 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 B3GALT1Q9Y5Z6 326 aa4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
AC055855.1-201ENST00000489563 MYOCOSA0A1B0GUC4 107 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 ACOT7O00154 380 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 DVL2O14641 736 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 FOXP2O15409 715 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 CYP17A1P05093 508 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 YBX3P16989 372 aaKnown RBP eCLIP4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 PFKLP17858 780 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 FAM50AQ14320 339 aaKnown RBP4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 SEC23AQ15436 765 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 IQSEC1Q6DN90 963 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 CC2D1AQ6P1N0 951 aaPredicted RBP4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 TEPPQ6URK8 271 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 LHFPL2Q6ZUX7 228 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 FBXO15Q8NCQ5 510 aaPredicted RBP4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 KCNN1Q92952 543 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 ELF4Q99607 663 aaPredicted RBP4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 SGPP1Q9BX95 441 aa4.85□□□□□ -1.63
AC055855.1-201ENST00000489563 PDGFDQ9GZP0 370 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms