RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ADGRF4Q8IZF3 695 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 ADSSL1Q8N142 457 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 ZKSCAN4Q969J2 545 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-207ENST00000489357 WNK4Q96J92 1243 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 C16orf45Q96MC5 204 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-207ENST00000489357 MED15Q96RN5 788 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 BAG1Q99933 345 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-207ENST00000489357 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 PDCL3Q9H2J4 239 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 TMEM60Q9H2L4 133 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 GINM1Q9NU53 330 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 INTS13Q9NVM9 706 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 ABCB11O95342 1321 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 PHLPP2Q6ZVD8 1323 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 CYP3A7-CYP3A51PA0A087WV96 503 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 A0A1W2PQC6 194 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 AKR1B15C9JRZ8 316 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 CA12O43570 354 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 FGFR1OPO95684 399 aaKnown RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 HSPA8P11142 646 aaKnown RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 CYP3A7P24462 503 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 CAP2P40123 477 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 SLC1A4P43007 532 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 LBX1P52954 281 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 PPATQ06203 517 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 KARSQ15046 597 aaKnown RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 CCDC96Q2M329 555 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 HYIQ5T013 277 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 PPFIBP1Q86W92 1011 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 ERO1BQ86YB8 467 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 ZSCAN29Q8IWY8 852 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 LRRC47Q8N1G4 583 aaKnown RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 MBOAT7Q96N66 472 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 WRNIP1Q96S55 665 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 SRRTQ9BXP5 876 aaKnown RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 TRIM9Q9C026 710 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 PSTPIP2Q9H939 334 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 SAMSN1Q9NSI8 373 aaKnown RBP9.45□□□□□ -0.9
VTI1A-207ENST00000489357 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 KCNH4Q9UQ05 1017 aa9.45□□□□□ -0.9
VTI1A-207ENST00000489357 BAZ2BQ9UIF8 2168 aaKnown RBP9.44□□□□□ -0.9
VTI1A-207ENST00000489357 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 MPHOSPH10O00566 681 aaKnown RBP9.44□□□□□ -0.9
VTI1A-207ENST00000489357 KLRC4O43908 158 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 PLA2G6O60733 806 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 KIF20AO95235 890 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 PTPRAP18433 802 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 PLCG1P19174 1290 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 INHBEP58166 350 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 ETF1P62495 437 aaKnown RBP9.44□□□□□ -0.9
VTI1A-207ENST00000489357 ICA1Q05084 483 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 PPIL2Q13356 520 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 MOGSQ13724 837 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 TUBB2AQ13885 445 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 TCP11X2Q5H9J9 407 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 KRT79Q5XKE5 535 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 SV2BQ7L1I2 683 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
VTI1A-207ENST00000489357 SCYL3Q8IZE3 742 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 TC2NQ8N9U0 490 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 NELFBQ8WX92 580 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 OPTNQ96CV9 577 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 CDK5RAP3Q96JB5 506 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 PPP1R13BQ96KQ4 1090 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 TUBB2BQ9BVA1 445 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 AMNQ9BXJ7 453 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 CFHR5Q9BXR6 569 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 UBA5Q9GZZ9 404 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 SH2D4AQ9H788 454 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 ELP3Q9H9T3 547 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 EXOC1Q9NV70 894 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 AFG3L2Q9Y4W6 797 aa9.44□□□□□ -0.9
VTI1A-207ENST00000489357 FRMPD2Q68DX3 1309 aaPredicted RBP9.44□□□□□ -0.9
VTI1A-207ENST00000489357 KCNJ18B7U540 433 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 PIK3CDO00329 1044 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 CXCL11O14625 94 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 ADAMTS3O15072 1205 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 MFAP3LO75121 409 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 EEF2P13639 858 aaKnown RBP9.43□□□□□ -0.9
VTI1A-207ENST00000489357 CCNE1P24864 410 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 RFC5P40937 340 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 PRCPP42785 496 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 DNM2P50570 870 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 TUBB4BP68371 445 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 LRRC63Q05C16 580 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 KCNJ12Q14500 433 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 SLFN13Q68D06 897 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
VTI1A-207ENST00000489357 TMTC1Q8IUR5 882 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms