RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 COA3Q9Y2R0 106 aaPredicted RBP5.93□□□□□ -1.46
XRN1-213ENST00000489241 A0A1B0GTL3 188 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 C22orf46C9J442 243 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 MSCO60682 206 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 PPP1R11O60927 126 aaPredicted RBP5.92□□□□□ -1.46
XRN1-213ENST00000489241 ZBTB7AO95365 584 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 GUCY1A3Q02108 690 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 DLX2Q07687 328 aaPredicted RBP5.92□□□□□ -1.46
XRN1-213ENST00000489241 PRRT2Q7Z6L0 340 aaPredicted RBP5.92□□□□□ -1.46
XRN1-213ENST00000489241 ADGRG2Q8IZP9 1017 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 AFAP1L2Q8N4X5 818 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 SMARCC2Q8TAQ2 1214 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 DPF3Q92784 378 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 SPATA25Q9BR10 227 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 SLC52A2Q9HAB3 445 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 CLDND1Q9NY35 253 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 CHPF2Q9P2E5 772 aa5.92□□□□□ -1.46
XRN1-213ENST00000489241 ASXL2Q76L83 1435 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.91□□□□□ -1.46
XRN1-213ENST00000489241 FAM47E-STBD1D6RA91 191 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 GSTA4O15217 222 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 CACNB2Q08289 660 aaPredicted RBP5.91□□□□□ -1.46
XRN1-213ENST00000489241 BRDTQ58F21 947 aaPredicted RBP5.91□□□□□ -1.46
XRN1-213ENST00000489241 NT5DC1Q5TFE4 455 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 MROH9Q5TGP6 573 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 BRAPQ7Z569 592 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 FGD2Q7Z6J4 655 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 STRA8Q7Z7C7 330 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 DCP2Q8IU60 420 aaKnown RBP5.91□□□□□ -1.46
XRN1-213ENST00000489241 TEX2Q8IWB9 1127 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 ZNF526Q8TF50 670 aaPredicted RBP5.91□□□□□ -1.46
XRN1-213ENST00000489241 BDH2Q9BUT1 245 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 MCM8Q9UJA3 840 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 X6R8D5 127 aa5.91□□□□□ -1.46
XRN1-213ENST00000489241 B4E1Z4 1266 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 CRTAMO95727 393 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 SOD2P04179 222 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 GRK2P25098 689 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 GRK3P35626 688 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 EXOSC10Q01780 885 aaKnown RBP5.9□□□□□ -1.46
XRN1-213ENST00000489241 PAK1Q13153 545 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 RTP5Q14D33 572 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 ODR4Q5SWX8 454 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 ZFYVE27Q5T4F4 411 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 RIOX2Q8IUF8 465 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 CARFQ8N187 725 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 PLEKHO2Q8TD55 490 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 SCLYQ96I15 445 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 PCDHA9Q9Y5H5 950 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 PCDHA8Q9Y5H6 950 aa5.9□□□□□ -1.46
XRN1-213ENST00000489241 TNPO3Q9Y5L0 923 aaKnown RBP5.9□□□□□ -1.46
XRN1-213ENST00000489241 ALG1L2C9J202 215 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 PRICKLE3O43900 615 aaPredicted RBP5.89□□□□□ -1.47
XRN1-213ENST00000489241 DGKIO75912 1065 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 EYA4O95677 639 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 ASLP04424 464 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 NTRK1P04629 796 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 ADRB1P08588 477 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 POU3F2P20265 443 aaPredicted RBP5.89□□□□□ -1.47
XRN1-213ENST00000489241 FLT3P36888 993 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 ZNF460Q14592 562 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 PCBP1Q15365 356 aaKnown RBP eCLIP5.89□□□□□ -1.47
XRN1-213ENST00000489241 CHRNA2Q15822 529 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 DBX2Q6ZNG2 339 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 DDX46Q7L014 1031 aaKnown RBP5.89□□□□□ -1.47
XRN1-213ENST00000489241 ZC3H7AQ8IWR0 971 aaKnown RBP5.89□□□□□ -1.47
XRN1-213ENST00000489241 Q8N1Y9 231 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 PPM1KQ8N3J5 372 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 LEO1Q8WVC0 666 aaPredicted RBP5.89□□□□□ -1.47
XRN1-213ENST00000489241 JDP2Q8WYK2 163 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 CEP89Q96ST8 783 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 MTFR1LQ9H019 292 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 NTMQ9P121 344 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 JAG2Q9Y219 1238 aa5.89□□□□□ -1.47
XRN1-213ENST00000489241 THRAP3Q9Y2W1 955 aaKnown RBP5.89□□□□□ -1.47
XRN1-213ENST00000489241 OPA1O60313 960 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 MAFKO60675 156 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 NPTXRO95502 500 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 CYP2C8P10632 490 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 FPR2P25090 351 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 IGFALSP35858 605 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 GJA9P57773 515 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 ST5P78524 1137 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 PLP2Q04941 152 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 SPIRE1Q08AE8 756 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 EFEMP1Q12805 493 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 FAM50AQ14320 339 aaKnown RBP5.88□□□□□ -1.47
XRN1-213ENST00000489241 FAM47CQ5HY64 1035 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 UBXN11Q5T124 520 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 CCDC181Q5TID7 509 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 ATL2Q8NHH9 583 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 FBXW5Q969U6 566 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 BORCS6Q96GS4 357 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 NOX5Q96PH1 765 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 JAM3Q9BX67 310 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 AP5M1Q9H0R1 490 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms