RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FGGP02679 453 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 PDCLQ13371 301 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 MRPL46Q9H2W6 279 aaKnown RBP19.03■□□□□ 0.64
NPHP4-209ENST00000489180 DBNDD1Q9H9R9 158 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 BCS1LQ9Y276 419 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 PALMO75781 387 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 MECOMQ03112 1051 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 NLRP10Q86W26 655 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 EPC1Q9H2F5 836 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 PLCB4Q15147 1175 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 ATP6V0A1Q93050 837 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 SDCCAG3Q96C92 435 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 AKT3Q9Y243 479 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 SLMAPQ14BN4 828 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 CCDC17Q96LX7 622 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 UGGT1Q9NYU2 1555 aa19.03■□□□□ 0.64
NPHP4-209ENST00000489180 EIF3CLB5ME19 914 aaKnown RBP19.02■□□□□ 0.64
NPHP4-209ENST00000489180 TRPA1O75762 1119 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 TSTA3Q13630 321 aaPredicted RBP19.02■□□□□ 0.64
NPHP4-209ENST00000489180 TERF2Q15554 542 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 TBC1D1Q86TI0 1168 aaPredicted RBP19.02■□□□□ 0.64
NPHP4-209ENST00000489180 CXorf38Q8TB03 319 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 PPP1R16BQ96T49 567 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 EIF3CQ99613 913 aaKnown RBP19.02■□□□□ 0.64
NPHP4-209ENST00000489180 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 GUCY2CP25092 1073 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 SCARA5Q6ZMJ2 495 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 PARVGQ9HBI0 331 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 NEDD4P46934 1319 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 TTC4O95801 387 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 IL6STP40189 918 aaPredicted RBP19.02■□□□□ 0.64
NPHP4-209ENST00000489180 DNAAF3Q8N9W5 541 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 BANK1Q8NDB2 785 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 SLC7A3Q8WY07 619 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 TMEM206Q9H813 350 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 LEMD3Q9Y2U8 911 aa19.02■□□□□ 0.64
NPHP4-209ENST00000489180 PRR29P0C7W0 189 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 MCAMP43121 646 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 SLC12A1Q13621 1099 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 BBS9Q3SYG4 887 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 ALKBH5Q6P6C2 394 aaKnown RBP19.02■□□□□ 0.63
NPHP4-209ENST00000489180 SARM1Q6SZW1 724 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 TBC1D10CQ8IV04 446 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 GPR101Q96P66 508 aaPredicted RBP19.02■□□□□ 0.63
NPHP4-209ENST00000489180 BAG5Q9UL15 447 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 SLC4A1P02730 911 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 LIFRP42702 1097 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 MXI1P50539 228 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 TFDP1Q14186 410 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 AP1ARQ63HQ0 302 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 DACT3Q96B18 629 aaPredicted RBP19.02■□□□□ 0.63
NPHP4-209ENST00000489180 ELAC2Q9BQ52 826 aaKnown RBP19.02■□□□□ 0.63
NPHP4-209ENST00000489180 CACYBPQ9HB71 228 aaKnown RBP19.02■□□□□ 0.63
NPHP4-209ENST00000489180 ABHD10Q9NUJ1 306 aa19.02■□□□□ 0.63
NPHP4-209ENST00000489180 ESYT2A0FGR8 921 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 RNASELQ05823 741 aaKnown RBP19.01■□□□□ 0.63
NPHP4-209ENST00000489180 PSMD2Q13200 908 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 DCAF15Q66K64 600 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 MAML1Q92585 1016 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 WDR11Q9BZH6 1224 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 TXLNGQ9NUQ3 528 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 BMP3P12645 472 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 C7orf31Q8N865 590 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 SLC38A10Q9HBR0 1119 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 SERPINB13Q9UIV8 391 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 CNGA1P29973 690 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 GGCXP38435 758 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 MTERF2Q49AM1 385 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 SYDE2Q5VT97 1194 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 CYB5R4Q7L1T6 521 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 MYLK4Q86YV6 388 aaPredicted RBP19.01■□□□□ 0.63
NPHP4-209ENST00000489180 GINM1Q9NU53 330 aa19.01■□□□□ 0.63
NPHP4-209ENST00000489180 OXER1Q8TDS5 423 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 UBN2Q6ZU65 1347 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 NCF2P19878 526 aaPredicted RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 CDC37Q16543 378 aaPredicted RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 NUGGCQ68CJ6 796 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 MRPL47Q9HD33 250 aaKnown RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 ATG3Q9NT62 314 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 HMGB1P1B2RPK0 211 aaPredicted RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 GFPT1Q06210 699 aaPredicted RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 CC2D1AQ6P1N0 951 aaPredicted RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 IPO11Q9UI26 975 aaKnown RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 OR6B2Q6IFH4 312 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 RSPH3Q86UC2 560 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 N4BP2L2Q92802 583 aaPredicted RBP19■□□□□ 0.63
NPHP4-209ENST00000489180 ZWILCHQ9H900 591 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 ANLNQ9NQW6 1124 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 ADAM21Q9UKJ8 722 aa19■□□□□ 0.63
NPHP4-209ENST00000489180 MIS18BP1Q6P0N0 1132 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 TRIM42Q8IWZ5 723 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 SNX24Q9Y343 169 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 MGEA5O60502 916 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 STX1BP61266 288 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 LRRC63Q05C16 580 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 FBXO41Q8TF61 875 aa18.99■□□□□ 0.63
NPHP4-209ENST00000489180 ACTR5Q9H9F9 607 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms