RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 CDC25AP30304 524 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 USP17L6PQ6QN14 398 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 PRRT2Q7Z6L0 340 aaPredicted RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 NEK8Q86SG6 692 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 CPXCR1Q8N123 301 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 ZNF784Q8NCA9 323 aaPredicted RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 FERMT2Q96AC1 680 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 PAGE5Q96GU1 130 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 SLC38A10Q9HBR0 1119 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 MED4Q9NPJ6 270 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 SMCHD1A6NHR9 2005 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 CCNT1O60563 726 aaKnown RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 RNF40O75150 1001 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 SYF2O95926 243 aaKnown RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 TUBBP07437 444 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 GTF2A1P52655 376 aaPredicted RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 CORO7P57737 925 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 AMPD2Q01433 879 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 PTGDRQ13258 359 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 COG2Q14746 738 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 CT47A1Q5JQC4 288 aaPredicted RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 ICE2Q659A1 982 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 ARL6IP4Q66PJ3 421 aaKnown RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 WDR93Q6P2C0 686 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 CATSPERGQ6ZRH7 1159 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 CNKSR2Q8WXI2 1034 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 OTUD5Q96G74 571 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 EPSTI1Q96J88 318 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 MAP3K20Q9NYL2 800 aaKnown RBP10□□□□□ -0.81
EXOSC1-211ENST00000489158 ADAMTS5Q9UNA0 930 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 CTNND2Q9UQB3 1225 aa10□□□□□ -0.81
EXOSC1-211ENST00000489158 DSG3P32926 999 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 ATP2C1P98194 919 aaPredicted RBP9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 GHRHRQ02643 423 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 DPYDQ12882 1025 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 KRT31Q15323 416 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 CYP26C1Q6V0L0 522 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 MCF2L2Q86YR7 1114 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 AFAP1L1Q8TED9 768 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 CLMNQ96JQ2 1002 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 VPS16Q9H269 839 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 HOXC10Q9NYD6 342 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 MYO1AQ9UBC5 1043 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 CCPG1Q9ULG6 757 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 GUCA1BQ9UMX6 200 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 COL11A1P12107 1806 aaPredicted RBP9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 ITIH6Q6UXX5 1313 aa9.99□□□□□ -0.81
EXOSC1-211ENST00000489158 SPDYE3A6NKU9 549 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 TRAF5O00463 557 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 ATP2A1O14983 1001 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 N4BP3O15049 544 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 PPFIA4O75335 1185 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 CFBP00751 764 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 GCFC2P16383 781 aaKnown RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 HOXA7P31268 230 aaPredicted RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 PRPHP41219 470 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 IRX3P78415 501 aaPredicted RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 PABPC4Q13310 644 aaKnown RBP eCLIP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 SKIDA1Q1XH10 827 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 C2orf69Q8N8R5 385 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 EHMT1Q9H9B1 1298 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 GBA2Q9HCG7 927 aaPredicted RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 HDAC6Q9UBN7 1215 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 TRIM10Q9UDY6 481 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 ZNF536O15090 1300 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 MYH7BA7E2Y1 1941 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 VWA5AO00534 786 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 MEIS2O14770 477 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 IRF6O14896 467 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 USP11P51784 963 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 TKFCQ3LXA3 575 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 MB21D1Q8N884 522 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 PPM1EQ8WY54 764 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 STAMQ92783 540 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 OPTNQ96CV9 577 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 SLC10A4Q96EP9 437 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 AGBL1Q96MI9 1066 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 CHP1Q99653 195 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 ANO3Q9BYT9 981 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 VIPAS39Q9H9C1 493 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 RAVER2Q9HCJ3 691 aaKnown RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 TAB2Q9NYJ8 693 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 LIMA1Q9UHB6 759 aaKnown RBP9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 HPCAL4Q9UM19 191 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 RABGAP1Q9Y3P9 1069 aa9.98□□□□□ -0.81
EXOSC1-211ENST00000489158 GCOM1H8Y6P7 765 aaPredicted RBP9.97□□□□□ -0.81
EXOSC1-211ENST00000489158 ENC1O14682 589 aa9.97□□□□□ -0.81
EXOSC1-211ENST00000489158 POLR2MP0CAP2 368 aa9.97□□□□□ -0.81
EXOSC1-211ENST00000489158 ALAS1P13196 640 aa9.97□□□□□ -0.81
EXOSC1-211ENST00000489158 HOXA13P31271 388 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms