RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 TREML2Q5T2D2 321 aa20.14■□□□□ 0.81
POLR2J3-205ENST00000489144 HPS3Q969F9 1004 aa20.14■□□□□ 0.81
POLR2J3-205ENST00000489144 PCDHA12Q9UN75 941 aa20.14■□□□□ 0.81
POLR2J3-205ENST00000489144 CTDP1Q9Y5B0 961 aaPredicted RBP20.14■□□□□ 0.81
POLR2J3-205ENST00000489144 PHLPP2Q6ZVD8 1323 aa20.14■□□□□ 0.81
POLR2J3-205ENST00000489144 TMCO5BA8MYB1 307 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 GRB10Q13322 594 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 MTA1Q13330 715 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 AP3B2Q13367 1082 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 MSL3Q8N5Y2 521 aaKnown RBP20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 IL31RAQ8NI17 732 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 LENG9Q96B70 501 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 CDCA5Q96FF9 252 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 MED15Q96RN5 788 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 GDAQ9Y2T3 454 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 TRAF5O00463 557 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 PLS1Q14651 629 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 TMEM266Q2M3C6 531 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 E4F1Q66K89 784 aaPredicted RBP20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 KANK3Q6NY19 840 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 CRYGNQ8WXF5 182 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 PNMA5Q96PV4 448 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 WDR18Q9BV38 432 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 CARD6Q9BX69 1037 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 AS3MTQ9HBK9 375 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 SLC38A10Q9HBR0 1119 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 PDE11AQ9HCR9 933 aa20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 MRPL11Q9Y3B7 192 aaKnown RBP20.13■□□□□ 0.81
POLR2J3-205ENST00000489144 SREBF1P36956 1147 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 RWDD2BP57060 319 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 TRAF1Q13077 416 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 MCM6Q14566 821 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 NSMFQ6X4W1 530 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 CLEC4DQ8WXI8 215 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 HSD3B7Q9H2F3 369 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 CPSF2Q9P2I0 782 aaKnown RBP20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 VWA5AO00534 786 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 CHMP2AO43633 222 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 MYBL2P10244 700 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 CCNHP51946 323 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 MAP1SQ66K74 1059 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 ARMC2Q8NEN0 867 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 CCSER1Q9C0I3 900 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 SPATS2LQ9NUQ6 558 aaKnown RBP20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 AFG3L2Q9Y4W6 797 aa20.12■□□□□ 0.81
POLR2J3-205ENST00000489144 POTECB2RU33 542 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 RDXP35241 583 aaKnown RBP20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 USP14P54578 494 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 ETF1P62495 437 aaKnown RBP20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 NCAPH2Q6IBW4 605 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 GLT8D2Q9H1C3 349 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 FANCLQ9NW38 375 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 PHIPQ8WWQ0 1821 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 MEIS1O00470 390 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 RTN2O75298 545 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 SSBP05455 408 aaKnown RBP eCLIP20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 FXR2P51116 673 aaKnown RBP eCLIP20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 MAP3K9P80192 1104 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 NT5DC1Q5TFE4 455 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 DYMQ7RTS9 669 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 SPATA20Q8TB22 786 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 CABS1Q96KC9 395 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 PARD6BQ9BYG5 372 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 EPC1Q9H2F5 836 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 DNAI1Q9UI46 699 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 FAN1Q9Y2M0 1017 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 PPP2R3BQ9Y5P8 575 aa20.11■□□□□ 0.81
POLR2J3-205ENST00000489144 POTEB3A0JP26 581 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 MSH4O15457 936 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 USP11P51784 963 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 PREPLQ4J6C6 727 aaPredicted RBP20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 POTEBQ6S5H4 581 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 ETNPPLQ8TBG4 499 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 KCNMB3Q9NPA1 279 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 PITPNM2Q9BZ72 1349 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 CCDC151A5D8V7 595 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 DDX39AO00148 427 aaKnown RBP20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 PPP1R12BO60237 982 aaPredicted RBP20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 PLA2G6O60733 806 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 RPN1P04843 607 aaKnown RBP20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 GSDMDP57764 484 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 CYP4A11Q02928 519 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 ANKRD23Q86SG2 305 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 EEF2KMTQ96G04 330 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 PRDM16Q9HAZ2 1276 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 POLD4Q9HCU8 107 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 CSADQ9Y600 493 aa20.1■□□□□ 0.81
POLR2J3-205ENST00000489144 CENPFP49454 3210 aa20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 GTPBP6O43824 516 aaPredicted RBP20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 CAVIN2O95810 425 aa20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 CCT6AP40227 531 aaKnown RBP20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 MKRN3Q13064 507 aaKnown RBP20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 SNRNP48Q6IEG0 339 aaKnown RBP20.09■□□□□ 0.81
POLR2J3-205ENST00000489144 GADL1Q6ZQY3 521 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms