RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 LINC00116Q8NCU8 138 aa21.42■■□□□ 1.02
HMG20B-213ENST00000488973 SNX29Q8TEQ0 813 aa21.42■■□□□ 1.02
HMG20B-213ENST00000488973 ZNF473Q8WTR7 871 aaKnown RBP21.42■■□□□ 1.02
HMG20B-213ENST00000488973 LSM14BQ9BX40 385 aaKnown RBP21.42■■□□□ 1.02
HMG20B-213ENST00000488973 SBF2Q86WG5 1849 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 KLHL33A6NCF5 533 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 BTNL10A8MVZ5 291 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 TRAF5O00463 557 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 ERCC3P19447 782 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 MARSP56192 900 aaKnown RBP21.41■■□□□ 1.02
HMG20B-213ENST00000488973 POLR2FP61218 127 aaKnown RBP21.41■■□□□ 1.02
HMG20B-213ENST00000488973 GSTO1P78417 241 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 ITGB3BPQ13352 177 aaPredicted RBP21.41■■□□□ 1.02
HMG20B-213ENST00000488973 USP17L2Q6R6M4 530 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 LRIG3Q6UXM1 1119 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 GLIS3Q8NEA6 775 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 PIGSQ96S52 555 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 TAF1DQ9H5J8 278 aaPredicted RBP21.41■■□□□ 1.02
HMG20B-213ENST00000488973 TMEM260Q9NX78 707 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 AIPL1Q9NZN9 384 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 IRS2Q9Y4H2 1338 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 PPP2R5AQ15172 486 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 ZKSCAN8Q15776 578 aaPredicted RBP21.41■■□□□ 1.02
HMG20B-213ENST00000488973 KIAA0753Q2KHM9 967 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 PPP4R3AQ6IN85 833 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 TXNRD3Q86VQ6 643 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 NEDD1Q8NHV4 660 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 TGFBRAP1Q8WUH2 860 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 ISCUQ9H1K1 167 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 PLCB1Q9NQ66 1216 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 SNED1Q8TER0 1413 aa21.41■■□□□ 1.02
HMG20B-213ENST00000488973 DDX60LQ5H9U9 1706 aaKnown RBP21.41■■□□□ 1.02
HMG20B-213ENST00000488973 POTEMA6NI47 508 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 RAD51CO43502 376 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 SLC37A4O43826 429 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 COASYQ13057 564 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 NLRP14Q86W24 1093 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 DNAJC19Q96DA6 116 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 CCT8L2Q96SF2 557 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 EYA3Q99504 573 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 TMBIM4Q9HC24 238 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 A0A087X0T9 212 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 FAM228BP0C875 321 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 DNA2P51530 1060 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 MNAT1P51948 309 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
HMG20B-213ENST00000488973 KCNK18Q7Z418 384 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 ARFGAP2Q8N6H7 521 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 MYCBPAPQ8TBZ2 947 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 GJD4Q96KN9 370 aaPredicted RBP21.4■■□□□ 1.02
HMG20B-213ENST00000488973 NUDT12Q9BQG2 462 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 PLAAQ9Y263 795 aa21.4■■□□□ 1.02
HMG20B-213ENST00000488973 FAM107AO95990 144 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 CUL1Q13616 776 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 C10orf76Q5T2E6 689 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 TRIM59Q8IWR1 403 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 TAF4BQ92750 862 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 CABS1Q96KC9 395 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 NLRP3Q96P20 1036 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 RIOX1Q9H6W3 641 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 VAT1LQ9HCJ6 419 aa21.39■■□□□ 1.02
HMG20B-213ENST00000488973 GOLGA6L10A6NI86 522 aa21.39■■□□□ 1.01
HMG20B-213ENST00000488973 ONECUT3O60422 494 aaPredicted RBP21.39■■□□□ 1.01
HMG20B-213ENST00000488973 TDP2O95551 362 aa21.39■■□□□ 1.01
HMG20B-213ENST00000488973 KLHL30Q0D2K2 578 aa21.39■■□□□ 1.01
HMG20B-213ENST00000488973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.39■■□□□ 1.01
HMG20B-213ENST00000488973 PACSIN2Q9UNF0 486 aaPredicted RBP21.39■■□□□ 1.01
HMG20B-213ENST00000488973 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.39■■□□□ 1.01
HMG20B-213ENST00000488973 H0YHG0 523 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 EDIL3O43854 480 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 RAPGEF1Q13905 1077 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 FAM26FQ5R3K3 315 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 CEP85LQ5SZL2 805 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 C16orf86Q6ZW13 317 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 MAATS1Q7Z4T9 603 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 PBKQ96KB5 322 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 ZPR1O75312 459 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 CDK8P49336 464 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 RPS6KA1Q15418 735 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 TRADDQ15628 312 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 ASIC2Q16515 512 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 PANK4Q9NVE7 773 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 ADAMTS1Q9UHI8 967 aa21.38■■□□□ 1.01
HMG20B-213ENST00000488973 LDHCP07864 332 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 ADCY7P51828 1080 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 SETQ01105 290 aaPredicted RBP21.37■■□□□ 1.01
HMG20B-213ENST00000488973 DDR1Q08345 913 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
HMG20B-213ENST00000488973 MAPKAPK5Q8IW41 473 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 PACSIN1Q9BY11 444 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 NYXQ9GZU5 481 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 A1CFQ9NQ94 594 aaKnown RBP21.37■■□□□ 1.01
HMG20B-213ENST00000488973 SAP30BPQ9UHR5 308 aaKnown RBP21.37■■□□□ 1.01
HMG20B-213ENST00000488973 HSPA1LP34931 641 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 BICDL1Q6ZP65 573 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 PTF1AQ7RTS3 328 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 C3orf20Q8ND61 904 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 ACTRT1Q8TDG2 376 aa21.37■■□□□ 1.01
HMG20B-213ENST00000488973 SCFD2Q8WU76 684 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms