RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MAFGO15525 162 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 TLL1O43897 1013 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 LGR5O75473 907 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 ARHGEF15O94989 841 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 NEFLP07196 543 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 MARK3P27448 753 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 RCAN1P53805 252 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 GLG1Q92896 1179 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 COL25A1Q9BXS0 654 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 KCNH7Q9NS40 1196 aa13.65□□□□□ -0.22
CCHCR1-215ENST00000488920 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 CHD7Q9P2D1 2997 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 CTSHP09668 335 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 ARP10275 920 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 SCG2P13521 617 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 PSMA5P28066 241 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 ADAM17P78536 824 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 TAP1Q03518 808 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 PFKFB3Q16875 520 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 DBF4BQ8NFT6 615 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 ANO3Q9BYT9 981 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
CCHCR1-215ENST00000488920 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 ADAMTS3O15072 1205 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 ZNF76P36508 570 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 SPRED2Q7Z698 418 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 MICALL1Q8N3F8 863 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 FBXL16Q8N461 479 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 ZNF713Q8N859 430 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 PHKBQ93100 1093 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 GLT8D2Q9H1C3 349 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 SMARCAD1Q9H4L7 1026 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 JPH1Q9HDC5 661 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 ERAP1Q9NZ08 941 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 SLC9A2Q9UBY0 812 aa13.63□□□□□ -0.23
CCHCR1-215ENST00000488920 MEIS1O00470 390 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 PRPF3O43395 683 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 EFCAB14O75071 495 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 SREBF1P36956 1147 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 ITGB3BPQ13352 177 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 AP3B2Q13367 1082 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 PKN1Q16512 942 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 TET1Q8NFU7 2136 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 SEPT8Q92599 483 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 UIMC1Q96RL1 719 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 PCYT2Q99447 389 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 RAD9AQ99638 391 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 AGO4Q9HCK5 861 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 TRIP12Q14669 1992 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-215ENST00000488920 CAND2O75155 1236 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 GJB5O95377 273 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 CHRNA1P02708 482 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 ACTR2P61160 394 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 IGBP1P78318 339 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 GRIK4Q16099 956 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 MARCH8Q5T0T0 291 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 RUFY3Q7L099 469 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 ZBTB10Q96DT7 871 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 SLC26A6Q9BXS9 759 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 ZMYND12Q9H0C1 365 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 AZI2Q9H6S1 392 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 C6orf50Q9HD87 102 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 NFASCO94856 1347 aa13.61□□□□□ -0.23
CCHCR1-215ENST00000488920 FAM86B1E9PN63 330 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 DDX39AO00148 427 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 AMHP03971 560 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 FAM86B2P0C5J1 330 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 INSRRP14616 1297 aa13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-215ENST00000488920 NTRK3Q16288 839 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms