RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SEC16BQ96JE7 1060 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 IKZF4Q9H2S9 585 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 ARHGAP20Q9P2F6 1191 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 STRIP2Q9ULQ0 834 aa4.85□□□□□ -1.63
CCDC93-209ENST00000488908 SLC27A2O14975 620 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 RAD17O75943 681 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 CKMP06732 381 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 ENO2P09104 434 aaPredicted RBP4.84□□□□□ -1.63
CCDC93-209ENST00000488908 INHBCP55103 352 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 SKIDA1Q1XH10 827 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 STPG3Q8N7X2 389 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 PIP4K2CQ8TBX8 421 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 KCND1Q9NSA2 647 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 NUB1Q9Y5A7 615 aa4.84□□□□□ -1.63
CCDC93-209ENST00000488908 H0Y858 1186 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 FAHP16930 419 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 ACO1P21399 889 aaKnown RBP4.83□□□□□ -1.64
CCDC93-209ENST00000488908 GLRBP48167 497 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 DENND5AQ6IQ26 1287 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 POLNQ7Z5Q5 900 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 C1orf210Q8IVY1 113 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 TMEM145Q8NBT3 493 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 CLEC4DQ8WXI8 215 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 ANAPC16Q96DE5 110 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 FAM89AQ96GI7 184 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 CARD11Q9BXL7 1154 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 CDIP1Q9H305 208 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 NPFFR2Q9Y5X5 522 aa4.83□□□□□ -1.64
CCDC93-209ENST00000488908 A0A087X1B8 175 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 CR2P20023 1033 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 NANOS3P60323 173 aaKnown RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 DGCR2P98153 550 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 PAN2Q504Q3 1202 aaKnown RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 CD276Q5ZPR3 534 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 C6orf15Q6UXA7 325 aaPredicted RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 METTL16Q86W50 562 aaKnown RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 NEU4Q8WWR8 484 aaPredicted RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 C1orf159Q96HA4 380 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 PLEKHG4BQ96PX9 1271 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 JAM3Q9BX67 310 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.82□□□□□ -1.64
CCDC93-209ENST00000488908 SLC30A1Q9Y6M5 507 aa4.82□□□□□ -1.64
CCDC93-209ENST00000488908 PLSCR1O15162 318 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 SUSD5O60279 629 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 CUTAO60888 179 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 PPFIA2O75334 1257 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 PFKPQ01813 784 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 TUSC3Q13454 348 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 SLC35F1Q5T1Q4 408 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 Q6ZSN1 163 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 OTOP3Q7RTS5 596 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 FAM178BQ8IXR5 827 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 GPR27Q9NS67 375 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 PTPN22Q9Y2R2 807 aa4.81□□□□□ -1.64
CCDC93-209ENST00000488908 ZNF839A8K0R7 811 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 RECKO95980 971 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 C1SP09871 688 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 POLD1P28340 1107 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 ZMAT1Q5H9K5 638 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 DNAJC10Q8IXB1 793 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 UHMK1Q8TAS1 419 aaKnown RBP4.8□□□□□ -1.64
CCDC93-209ENST00000488908 KCTD13Q8WZ19 329 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 OR14A2Q96R54 314 aa4.8□□□□□ -1.64
CCDC93-209ENST00000488908 TACO1Q9BSH4 297 aaKnown RBP4.8□□□□□ -1.64
CCDC93-209ENST00000488908 PDGFDQ9GZP0 370 aaPredicted RBP4.8□□□□□ -1.64
CCDC93-209ENST00000488908 CDC14BO60729 498 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 IL18BPO95998 194 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 ADH4P08319 380 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 ACRV1P26436 265 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 MAP4K2Q12851 820 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 TUBA3CQ13748 450 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 LARP1BQ659C4 914 aaKnown RBP4.79□□□□□ -1.64
CCDC93-209ENST00000488908 TUBA3EQ6PEY2 450 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 MAMDC4Q6UXC1 1216 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
CCDC93-209ENST00000488908 NT5DC4Q86YG4 428 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
CCDC93-209ENST00000488908 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 CACTINQ8WUQ7 758 aaKnown RBP4.79□□□□□ -1.64
CCDC93-209ENST00000488908 DPYSL5Q9BPU6 564 aa4.79□□□□□ -1.64
CCDC93-209ENST00000488908 AGRPO00253 132 aa4.78□□□□□ -1.64
CCDC93-209ENST00000488908 U2SURPO15042 1029 aaKnown RBP4.78□□□□□ -1.64
CCDC93-209ENST00000488908 LTFP02788 710 aa4.78□□□□□ -1.64
CCDC93-209ENST00000488908 GNAT1P11488 350 aa4.78□□□□□ -1.64
CCDC93-209ENST00000488908 RPS19P39019 145 aaKnown RBP4.78□□□□□ -1.64
CCDC93-209ENST00000488908 TOP3AQ13472 1001 aaPredicted RBP4.78□□□□□ -1.64
CCDC93-209ENST00000488908 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.64
CCDC93-209ENST00000488908 DPP8Q6V1X1 898 aaPredicted RBP4.78□□□□□ -1.64
CCDC93-209ENST00000488908 ACTR10Q9NZ32 417 aa4.78□□□□□ -1.64
CCDC93-209ENST00000488908 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
CCDC93-209ENST00000488908 NR2E1Q9Y466 385 aa4.78□□□□□ -1.64
CCDC93-209ENST00000488908 ESYT3A0FGR9 886 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 B2RBV5 119 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 MSCO60682 206 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 DDAH1O94760 285 aa4.77□□□□□ -1.65
CCDC93-209ENST00000488908 MAKP20794 623 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms