RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 EMSYQ7Z589 1322 aa10.05□□□□□ -0.8
SMKR1-202ENST00000488846 RANBP2P49792 3224 aaKnown RBP10.04□□□□□ -0.8
SMKR1-202ENST00000488846 NOP56O00567 594 aaKnown RBP10.04□□□□□ -0.8
SMKR1-202ENST00000488846 CD4P01730 458 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 PDCP20941 246 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 TOB1P50616 345 aaPredicted RBP10.04□□□□□ -0.8
SMKR1-202ENST00000488846 ATN1P54259 1190 aaPredicted RBP10.04□□□□□ -0.8
SMKR1-202ENST00000488846 ACTR2P61160 394 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 KRT76Q01546 638 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 TRIM60Q495X7 471 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 FAM126BQ8IXS8 530 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 SMAP1Q8IYB5 467 aaPredicted RBP10.04□□□□□ -0.8
SMKR1-202ENST00000488846 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 MTMR9Q96QG7 549 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 PCYT2Q99447 389 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 KATNAL1Q9BW62 490 aa10.04□□□□□ -0.8
SMKR1-202ENST00000488846 H3BRB1 525 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 EVI5O60447 810 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 SORBS3O60504 671 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 CCNT1O60563 726 aaKnown RBP10.03□□□□□ -0.8
SMKR1-202ENST00000488846 ZNF286BP0CG31 522 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
SMKR1-202ENST00000488846 SYT1P21579 422 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 TCF7P36402 384 aaPredicted RBP10.03□□□□□ -0.8
SMKR1-202ENST00000488846 PSEN2P49810 448 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 PSMC6P62333 389 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 TLE2Q04725 743 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 SPIRE1Q08AE8 756 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 FAAP100Q0VG06 881 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 PPP2R5CQ13362 524 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 MFSD10Q14728 455 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 PLPPR4Q7Z2D5 763 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 TUT1Q9H6E5 874 aaKnown RBP10.03□□□□□ -0.8
SMKR1-202ENST00000488846 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
SMKR1-202ENST00000488846 H3BQV1 296 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 GAS7O60861 476 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 SUPT20HL2P0C7V6 817 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 SFNP31947 248 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 SLC26A2P50443 739 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 ADAM17P78536 824 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 KIAA0753Q2KHM9 967 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 LRCH2Q5VUJ6 765 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 BRAPQ7Z569 592 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 SLFN12Q8IYM2 578 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 C4orf32Q8N8J7 132 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 DPF3Q92784 378 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 VTI1AQ96AJ9 217 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 CTAGE1Q96RT6 745 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 UNC45AQ9H3U1 944 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 SMARCAD1Q9H4L7 1026 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 PDLIM7Q9NR12 457 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 GTF2IRD1Q9UHL9 959 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 VAV3Q9UKW4 847 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 TBX21Q9UL17 535 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 PCDHA10Q9Y5I2 948 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 MAFBQ9Y5Q3 323 aaPredicted RBP10.02□□□□□ -0.81
SMKR1-202ENST00000488846 NR2E3Q9Y5X4 410 aa10.02□□□□□ -0.81
SMKR1-202ENST00000488846 CEP290O15078 2479 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 DCDC2CA8MYV0 355 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 WDR64B1ANS9 1081 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 KIAA0355O15063 1070 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 B4GALT4O60513 344 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 NEMFO60524 1076 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 CLTBP09497 229 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 STAT5BP51692 787 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 JAK3P52333 1124 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 SP4Q02446 784 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 RBL2Q08999 1139 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
SMKR1-202ENST00000488846 HIC1Q14526 733 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 RILPL1Q5EBL4 403 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 TTC38Q5R3I4 469 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 MIS18BP1Q6P0N0 1132 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 CCDC60Q8IWA6 550 aaPredicted RBP10.01□□□□□ -0.81
SMKR1-202ENST00000488846 GJA10Q969M2 543 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
SMKR1-202ENST00000488846 TEKT3Q9BXF9 490 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 TMEM60Q9H2L4 133 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 RNPEPQ9H4A4 650 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 DISC1Q9NRI5 854 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 ZNF215Q9UL58 517 aaPredicted RBP10.01□□□□□ -0.81
SMKR1-202ENST00000488846 NOL7Q9UMY1 257 aaKnown RBP10.01□□□□□ -0.81
SMKR1-202ENST00000488846 MTMR6Q9Y217 621 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 IGSF9BQ9UPX0 1349 aa10.01□□□□□ -0.81
SMKR1-202ENST00000488846 DDX39AO00148 427 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 LAD1O00515 517 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 TLR3O15455 904 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 STX6O43752 255 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 PQBP1O60828 265 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 BAG4O95429 457 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 PSAPP07602 524 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 SMIM10L2AP0DMW4 78 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 SMIM10L2BP0DMW5 78 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 ATP4AP20648 1035 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms